RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
MDM2-216ENST00000471946 NXPE3Q969Y0 559 aa6.86□□□□□ -1.31
MDM2-216ENST00000471946 NPHS2Q9NP85 383 aa6.86□□□□□ -1.31
MDM2-216ENST00000471946 PODXL2Q9NZ53 605 aa6.86□□□□□ -1.31
MDM2-216ENST00000471946 TRIM33Q9UPN9 1127 aa6.86□□□□□ -1.31
MDM2-216ENST00000471946 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
MDM2-216ENST00000471946 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
MDM2-216ENST00000471946 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
MDM2-216ENST00000471946 COL19A1Q14993 1142 aa6.85□□□□□ -1.31
MDM2-216ENST00000471946 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
MDM2-216ENST00000471946 KIAA0319Q5VV43 1072 aa6.85□□□□□ -1.31
MDM2-216ENST00000471946 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
MDM2-216ENST00000471946 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
MDM2-216ENST00000471946 PRDM6Q9NQX0 595 aa6.85□□□□□ -1.31
MDM2-216ENST00000471946 RNF19AQ9NV58 838 aa6.85□□□□□ -1.31
MDM2-216ENST00000471946 GADD45BO75293 160 aaPredicted RBP6.84□□□□□ -1.31
MDM2-216ENST00000471946 NID1P14543 1247 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 BAG6P46379 1132 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 ALG1LQ6GMV1 187 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 ILDR2Q71H61 639 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 IL22RA1Q8N6P7 574 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 TMEM102Q8N9M5 508 aaPredicted RBP6.84□□□□□ -1.31
MDM2-216ENST00000471946 TRIM11Q96F44 468 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
MDM2-216ENST00000471946 NLRP2Q9NX02 1062 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 MKL2Q9ULH7 1088 aa6.84□□□□□ -1.31
MDM2-216ENST00000471946 KCNMA1Q12791 1236 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 TRAPPC3LQ5T215 181 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 MSL1Q68DK7 614 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 FBXO33Q7Z6M2 555 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 TCF12Q99081 682 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 PLVAPQ9BX97 442 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 EHD4Q9H223 541 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 SUV39H2Q9H5I1 410 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 LIN7BQ9HAP6 207 aa6.83□□□□□ -1.32
MDM2-216ENST00000471946 METTL12A8MUP2 240 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 CDC25BP30305 580 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 RASSF7Q02833 373 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 SCARF2Q96GP6 870 aaPredicted RBP6.82□□□□□ -1.32
MDM2-216ENST00000471946 ADAM19Q9H013 955 aa6.82□□□□□ -1.32
MDM2-216ENST00000471946 GNB5O14775 395 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 GDF11O95390 407 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 CDC27P30260 824 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 GRIA4P48058 902 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 GRM2Q14416 872 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 NXPE4Q6UWF7 544 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 PODNQ7Z5L7 613 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 GLIS3Q8NEA6 775 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
MDM2-216ENST00000471946 BCL2L13Q9BXK5 485 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 BCO2Q9BYV7 579 aa6.81□□□□□ -1.32
MDM2-216ENST00000471946 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
MDM2-216ENST00000471946 LINC01387J3KSC0 135 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
MDM2-216ENST00000471946 PTPRAP18433 802 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 OSBPL7Q9BZF2 842 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 BHLHE41Q9C0J9 482 aaPredicted RBP6.8□□□□□ -1.32
MDM2-216ENST00000471946 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 PARP2Q9UGN5 583 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 PPME1Q9Y570 386 aa6.8□□□□□ -1.32
MDM2-216ENST00000471946 A0A096LPE4 126 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 TXNDC11Q6PKC3 985 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 CACTIN-AS1Q8N1I8 211 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 FOXD4L4Q8WXT5 416 aaPredicted RBP6.79□□□□□ -1.32
MDM2-216ENST00000471946 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
MDM2-216ENST00000471946 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 PIK3R2O00459 728 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 EPHA1P21709 976 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 COL8A1P27658 744 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 TRIM28Q13263 835 aaKnown RBP6.78□□□□□ -1.32
MDM2-216ENST00000471946 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 FAM161BQ96MY7 647 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
MDM2-216ENST00000471946 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 FAM177BA6PVY3 158 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
MDM2-216ENST00000471946 FCGRTP55899 365 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 FGD1P98174 961 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
MDM2-216ENST00000471946 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 ZNF326Q5BKZ1 582 aaKnown RBP6.77□□□□□ -1.33
MDM2-216ENST00000471946 HGSNATQ68CP4 663 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 TRAK1Q9UPV9 953 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 SPG7Q9UQ90 795 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 AK5Q9Y6K8 562 aa6.77□□□□□ -1.33
MDM2-216ENST00000471946 GIPC1O14908 333 aa6.76□□□□□ -1.33
MDM2-216ENST00000471946 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
MDM2-216ENST00000471946 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms