RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CAMK2GQ13555 558 aaPredicted RBP8.15□□□□□ -1.11
NF1-208ENST00000471572 TCEA2Q15560 299 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 MTERF2Q49AM1 385 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 THNSL2Q86YJ6 484 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 PPARGC1BQ86YN6 1023 aaKnown RBP8.15□□□□□ -1.11
NF1-208ENST00000471572 ACTR10Q9NZ32 417 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 TCEAL9Q9UHQ7 104 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 PFDN2Q9UHV9 154 aa8.15□□□□□ -1.11
NF1-208ENST00000471572 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
NF1-208ENST00000471572 GRNP28799 593 aaKnown RBP8.14□□□□□ -1.11
NF1-208ENST00000471572 FCGRTP55899 365 aa8.14□□□□□ -1.11
NF1-208ENST00000471572 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
NF1-208ENST00000471572 DDX42Q86XP3 938 aaKnown RBP eCLIP8.14□□□□□ -1.11
NF1-208ENST00000471572 NKD1Q969G9 470 aa8.14□□□□□ -1.11
NF1-208ENST00000471572 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
NF1-208ENST00000471572 UBA5Q9GZZ9 404 aa8.14□□□□□ -1.11
NF1-208ENST00000471572 TSPAN6O43657 245 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 ALDH1L1O75891 902 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 CENPBP07199 599 aaPredicted RBP8.13□□□□□ -1.11
NF1-208ENST00000471572 CELA3AP09093 270 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 INPP5BP32019 993 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 VEGFBP49765 207 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 LIG3P49916 1009 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 LSM11P83369 360 aaKnown RBP eCLIP8.13□□□□□ -1.11
NF1-208ENST00000471572 CCSAPQ6IQ19 270 aaPredicted RBP8.13□□□□□ -1.11
NF1-208ENST00000471572 FBXO27Q8NI29 283 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
NF1-208ENST00000471572 POTEB3A0JP26 581 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 CNGA1P29973 690 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
NF1-208ENST00000471572 SEZ6Q53EL9 994 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 PEAR1Q5VY43 1037 aaPredicted RBP8.13□□□□□ -1.11
NF1-208ENST00000471572 POTEBQ6S5H4 581 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 CHST12Q9NRB3 414 aa8.13□□□□□ -1.11
NF1-208ENST00000471572 KDM2BQ8NHM5 1336 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 GJB6O95452 261 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 STAT3P40763 770 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 EIF6P56537 245 aaKnown RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 TM4SF20Q53R12 229 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 FAM196AQ6ZSG2 479 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 RELTQ969Z4 430 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 CMTR1Q8N1G2 835 aaKnown RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 NIFKQ9BYG3 293 aaKnown RBP8.12□□□□□ -1.11
NF1-208ENST00000471572 RBSNQ9H1K0 784 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 PPM1HQ9ULR3 514 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 PLAAQ9Y263 795 aa8.12□□□□□ -1.11
NF1-208ENST00000471572 A0A1W2PP55 124 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 B2RBV5 119 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 TFE3P19532 575 aaPredicted RBP8.11□□□□□ -1.11
NF1-208ENST00000471572 LMNB2Q03252 620 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 PLA2G2CQ5R387 149 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 RHPN1Q8TCX5 695 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 APBA2Q99767 749 aa8.11□□□□□ -1.11
NF1-208ENST00000471572 A0A087X0B3 334 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 TLR3O15455 904 aaKnown RBP8.1□□□□□ -1.11
NF1-208ENST00000471572 ADH1AP07327 375 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 IER5Q5VY09 327 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 TPTE2Q6XPS3 522 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 C11orf96Q7Z7L8 435 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 EHBP1Q8NDI1 1231 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 EHD4Q9H223 541 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 TERF2IPQ9NYB0 399 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 AKAP2Q9Y2D5 859 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
NF1-208ENST00000471572 RLBP1P12271 317 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 PDE6BP35913 854 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 HSP90AB4PQ58FF6 505 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 UBR7Q8N806 425 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 IL17RAQ96F46 866 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 MAF1Q9H063 256 aa8.1□□□□□ -1.11
NF1-208ENST00000471572 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 KIF3BO15066 747 aa8.09□□□□□ -1.11
NF1-208ENST00000471572 ADH1CP00326 375 aa8.09□□□□□ -1.11
NF1-208ENST00000471572 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 ARSDP51689 593 aa8.09□□□□□ -1.11
NF1-208ENST00000471572 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 BNC2Q6ZN30 1099 aaPredicted RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
NF1-208ENST00000471572 ZMYM5Q9UJ78 669 aa8.09□□□□□ -1.11
NF1-208ENST00000471572 SH3BP5O60239 455 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 SCGB1D2O95969 90 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 EPHB1P54762 984 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 MCL1Q07820 350 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 SYCP2LQ5T4T6 812 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
NF1-208ENST00000471572 SHTN1A0MZ66 631 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms