RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 BBOX1O75936 387 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 SCARF1Q14162 830 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 PRAMEF18Q5VWM3 479 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 ZNF34Q8IZ26 560 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 EFCAB3Q8N7B9 438 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 CD99L2Q8TCZ2 262 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 LRCH3Q96II8 777 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 NLRP3Q96P20 1036 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 MAP3K15Q6ZN16 1313 aa8.72□□□□□ -1.01
GTF2B-205ENST00000471471 VIL1P09327 827 aaKnown RBP8.71□□□□□ -1.02
GTF2B-205ENST00000471471 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.02
GTF2B-205ENST00000471471 SLC10A5Q5PT55 438 aa8.71□□□□□ -1.02
GTF2B-205ENST00000471471 TTLL7Q6ZT98 887 aa8.71□□□□□ -1.02
GTF2B-205ENST00000471471 PANK3Q9H999 370 aa8.71□□□□□ -1.02
GTF2B-205ENST00000471471 KDM3BQ7LBC6 1761 aa8.71□□□□□ -1.02
GTF2B-205ENST00000471471 SCN9AQ15858 1988 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF2B-205ENST00000471471 ALDH1A1P00352 501 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF2B-205ENST00000471471 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
GTF2B-205ENST00000471471 WASHC4Q2M389 1173 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 ERO1AQ96HE7 468 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 EFCC1Q9HA90 598 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 LRRC37AA6NMS7 1700 aa8.7□□□□□ -1.02
GTF2B-205ENST00000471471 LAMB2P55268 1798 aa8.69□□□□□ -1.02
GTF2B-205ENST00000471471 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
GTF2B-205ENST00000471471 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
GTF2B-205ENST00000471471 ECE2O60344 883 aa8.69□□□□□ -1.02
GTF2B-205ENST00000471471 HSPA5P11021 654 aaKnown RBP8.69□□□□□ -1.02
GTF2B-205ENST00000471471 SHISA4Q96DD7 197 aa8.69□□□□□ -1.02
GTF2B-205ENST00000471471 POLLQ9UGP5 575 aa8.69□□□□□ -1.02
GTF2B-205ENST00000471471 LAMA2P24043 3122 aaKnown RBP8.69□□□□□ -1.02
GTF2B-205ENST00000471471 TAF1P21675 1872 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 A0A1W2PPC1 479 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 GRAPQ13588 217 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 SLC4A8Q2Y0W8 1093 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 VARS2Q5ST30 1063 aaKnown RBP8.68□□□□□ -1.02
GTF2B-205ENST00000471471 LDLRAD1Q5T700 205 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 TMEM92Q6UXU6 159 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 UBE2Q1Q7Z7E8 422 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 GRAPLQ8TC17 118 aaPredicted RBP8.68□□□□□ -1.02
GTF2B-205ENST00000471471 DPF3Q92784 378 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
GTF2B-205ENST00000471471 PCGF6Q9BYE7 350 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 ZBTB3Q9H5J0 574 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 PTCH2Q9Y6C5 1203 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 ANKRD36CQ5JPF3 1778 aa8.68□□□□□ -1.02
GTF2B-205ENST00000471471 MANSC4A6NHS7 340 aaPredicted RBP8.67□□□□□ -1.02
GTF2B-205ENST00000471471 COL4A1P02462 1669 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 CRHR2Q13324 411 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 TTLL12Q14166 644 aaPredicted RBP8.67□□□□□ -1.02
GTF2B-205ENST00000471471 SLC9C1Q4G0N8 1177 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
GTF2B-205ENST00000471471 PPP1R42Q7Z4L9 355 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 GMLQ99445 158 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 POLR3GLQ9BT43 218 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 MYOZ2Q9NPC6 264 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 PRDM6Q9NQX0 595 aa8.67□□□□□ -1.02
GTF2B-205ENST00000471471 LAMB4A4D0S4 1761 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 LAMB1P07942 1786 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 DDX60Q8IY21 1712 aaKnown RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 HCLS1P14317 486 aaPredicted RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 INHBEP58166 350 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 GPSM2P81274 684 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 SP3Q02447 781 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 TCIRG1Q13488 830 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 PARP10Q53GL7 1025 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 KIF6Q6ZMV9 814 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 Q7L0L9 218 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 NBPF11Q86T75 865 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 PHACTR3Q96KR7 559 aa8.66□□□□□ -1.02
GTF2B-205ENST00000471471 UTP14AQ9BVJ6 771 aaKnown RBP8.66□□□□□ -1.02
GTF2B-205ENST00000471471 NBPF9Q3BBW0 867 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
GTF2B-205ENST00000471471 MCM10Q7L590 875 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
GTF2B-205ENST00000471471 DEFB123Q8N688 67 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 AGBL3Q8NEM8 1001 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 SH3TC2Q8TF17 1288 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 NECTIN2Q92692 538 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 PTPN18Q99952 460 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 NSFL1CQ9UNZ2 370 aaKnown RBP8.65□□□□□ -1.02
GTF2B-205ENST00000471471 FZD1Q9UP38 647 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 TTC28Q96AY4 2481 aa8.65□□□□□ -1.02
GTF2B-205ENST00000471471 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
GTF2B-205ENST00000471471 ZBTB48P10074 688 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms