RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 COL13A1Q5TAT6 717 aaPredicted RBP9.73□□□□□ -0.85
SMC5-202ENST00000471372 NBPF6Q5VWK0 638 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 PHC3Q8NDX5 983 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 MRFAP1L1Q96HT8 127 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 NBPF4Q96M43 638 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 GAS2L1Q99501 681 aaPredicted RBP9.73□□□□□ -0.85
SMC5-202ENST00000471372 ZKSCAN3Q9BRR0 538 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 DYRK1BQ9Y463 629 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
SMC5-202ENST00000471372 RARAP10276 462 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 XRCC5P13010 732 aaKnown RBP9.72□□□□□ -0.85
SMC5-202ENST00000471372 GARTP22102 1010 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 SOX9P48436 509 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
SMC5-202ENST00000471372 ANKS3Q6ZW76 656 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 SV2BQ7L1I2 683 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 CCNJLQ8IV13 435 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 KCNQ5Q9NR82 932 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
SMC5-202ENST00000471372 TRPA1O75762 1119 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 PF4P02776 101 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 BMP1P13497 986 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 LIG3P49916 1009 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 GRIN2CQ14957 1233 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 OSMRQ99650 979 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 NT5C1AQ9BXI3 368 aa9.71□□□□□ -0.86
SMC5-202ENST00000471372 GREM1O60565 184 aa9.7□□□□□ -0.86
SMC5-202ENST00000471372 RLBP1P12271 317 aa9.7□□□□□ -0.86
SMC5-202ENST00000471372 GRIA4P48058 902 aa9.7□□□□□ -0.86
SMC5-202ENST00000471372 ATP13A2Q9NQ11 1180 aa9.7□□□□□ -0.86
SMC5-202ENST00000471372 DCDC2BA2VCK2 349 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 METTL12A8MUP2 240 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 EFSO43281 561 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 KLF4O43474 513 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 WFS1O76024 890 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 KIF4AO95239 1232 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 THBS1P07996 1170 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 FAM157BP0CG42 384 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 CAMK2GQ13555 558 aaPredicted RBP9.69□□□□□ -0.86
SMC5-202ENST00000471372 SPRED3Q2MJR0 410 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
SMC5-202ENST00000471372 HHIPQ96QV1 700 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 STRN4Q9NRL3 753 aa9.69□□□□□ -0.86
SMC5-202ENST00000471372 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
SMC5-202ENST00000471372 KHNYNO15037 678 aaKnown RBP9.68□□□□□ -0.86
SMC5-202ENST00000471372 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
SMC5-202ENST00000471372 NFKB1P19838 968 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 CRKP46108 304 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 SCARF1Q14162 830 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 SNAP47Q5SQN1 464 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 MKL1Q969V6 931 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
SMC5-202ENST00000471372 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 HCN2Q9UL51 889 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 STRIP2Q9ULQ0 834 aa9.68□□□□□ -0.86
SMC5-202ENST00000471372 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 ENC1O14682 589 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 PSAPP07602 524 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 APOBRQ0VD83 1088 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 TRIM46Q7Z4K8 759 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 CPLX3Q8WVH0 158 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 ANAPC16Q96DE5 110 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 GPATCH3Q96I76 525 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 SRPK1Q96SB4 655 aaKnown RBP9.67□□□□□ -0.86
SMC5-202ENST00000471372 TRIM55Q9BYV6 548 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 CEP44Q9C0F1 390 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 SIRPGQ9P1W8 387 aa9.67□□□□□ -0.86
SMC5-202ENST00000471372 TFE3P19532 575 aaPredicted RBP9.66□□□□□ -0.86
SMC5-202ENST00000471372 LMNB2Q03252 620 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 HYAL2Q12891 473 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 COL9A2Q14055 689 aaPredicted RBP9.66□□□□□ -0.86
SMC5-202ENST00000471372 RAB33AQ14088 237 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 CEP120Q8N960 986 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 NECAB3Q96P71 396 aaPredicted RBP9.66□□□□□ -0.86
SMC5-202ENST00000471372 PNMA5Q96PV4 448 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 DZANK1Q9NVP4 752 aa9.66□□□□□ -0.86
SMC5-202ENST00000471372 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
SMC5-202ENST00000471372 PAGE1O75459 146 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 ITPKAP23677 461 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 HSD3B2P26439 372 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 SOX18P35713 384 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 TNP2Q05952 138 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 UBAP2LQ14157 1087 aaKnown RBP9.65□□□□□ -0.86
SMC5-202ENST00000471372 TTBK2Q6IQ55 1244 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 FIGNL1Q6PIW4 674 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 CCDC81Q6ZN84 652 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
SMC5-202ENST00000471372 NKD1Q969G9 470 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 NSUN5Q96P11 429 aaKnown RBP9.65□□□□□ -0.86
SMC5-202ENST00000471372 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 SEC31BQ9NQW1 1179 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
SMC5-202ENST00000471372 NFKBIEO00221 500 aa9.64□□□□□ -0.87
SMC5-202ENST00000471372 MAPTP10636 758 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms