RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	EN1	Q05925	392 aa	Predicted RBP	31.29	■■■□□ 2.6
U2AF1-208	ENST00000471250	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.27	■■■□□ 2.6
U2AF1-208	ENST00000471250	CRY2	Q49AN0	593 aa		31.27	■■■□□ 2.6
U2AF1-208	ENST00000471250	MCMDC2	Q4G0Z9	681 aa		31.27	■■■□□ 2.6
U2AF1-208	ENST00000471250	HELLS	Q9NRZ9	838 aa		31.27	■■■□□ 2.6
U2AF1-208	ENST00000471250	RNF113A	O15541	343 aa	Known RBP	31.26	■■■□□ 2.6
U2AF1-208	ENST00000471250	GRAP	Q13588	217 aa		31.26	■■■□□ 2.6
U2AF1-208	ENST00000471250	GRAPL	Q8TC17	118 aa	Predicted RBP	31.26	■■■□□ 2.6
U2AF1-208	ENST00000471250	NRXN2	Q9P2S2	1712 aa		31.26	■■■□□ 2.59
U2AF1-208	ENST00000471250	ZMYM1	Q5SVZ6	1142 aa		31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	PI16	Q6UXB8	463 aa		31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	MAP4K1	Q92918	833 aa		31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	ANKRD2	Q9GZV1	360 aa		31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	CHGB	P05060	677 aa		31.25	■■■□□ 2.59
U2AF1-208	ENST00000471250	TTF1	Q15361	905 aa	Predicted RBP	31.24	■■■□□ 2.59
U2AF1-208	ENST00000471250	CD2BP2	O95400	341 aa	Known RBP	31.23	■■■□□ 2.59
U2AF1-208	ENST00000471250	ZFY	P08048	801 aa	Predicted RBP	31.23	■■■□□ 2.59
U2AF1-208	ENST00000471250	KCNB2	Q92953	911 aa		31.23	■■■□□ 2.59
U2AF1-208	ENST00000471250	HMG20B	Q9P0W2	317 aa		31.23	■■■□□ 2.59
U2AF1-208	ENST00000471250	CYP2E1	P05181	493 aa	Predicted RBP	31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	RPGR	Q92834	1020 aa	Known RBP	31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	SEC62	Q99442	399 aa	Known RBP	31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	MYH7	P12883	1935 aa		31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	KLRG2	A4D1S0	409 aa	Predicted RBP	31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	BCAM	P50895	628 aa		31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	SLC15A2	Q16348	729 aa		31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.22	■■■□□ 2.59
U2AF1-208	ENST00000471250	QSER1	Q2KHR3	1735 aa		31.21	■■■□□ 2.59
U2AF1-208	ENST00000471250	NECTIN1	Q15223	517 aa		31.21	■■■□□ 2.59
U2AF1-208	ENST00000471250	STK32B	Q9NY57	414 aa		31.21	■■■□□ 2.59
U2AF1-208	ENST00000471250	RBM8A	Q9Y5S9	174 aa	Known RBP	31.21	■■■□□ 2.59
U2AF1-208	ENST00000471250	SNX14	Q9Y5W7	946 aa		31.21	■■■□□ 2.59
U2AF1-208	ENST00000471250	SPATA5	Q8NB90	893 aa		31.2	■■■□□ 2.59
U2AF1-208	ENST00000471250	RBM17	Q96I25	401 aa	Known RBP	31.2	■■■□□ 2.59
U2AF1-208	ENST00000471250	ZNF804B	A4D1E1	1349 aa		31.2	■■■□□ 2.58
U2AF1-208	ENST00000471250	ST18	O60284	1047 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	SF3B2	Q13435	895 aa	Known RBP	31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	RASGRF1	Q13972	1273 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	IL27	Q8NEV9	243 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250		K7ELQ4	463 aa	Predicted RBP	31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	BAG6	P46379	1132 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	SLFNL1	Q499Z3	407 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	CCDC129	Q6ZRS4	1044 aa		31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	PIH1D3	Q9NQM4	214 aa	Known RBP	31.19	■■■□□ 2.58
U2AF1-208	ENST00000471250	ANKRD31	Q8N7Z5	1873 aa		31.18	■■■□□ 2.58
U2AF1-208	ENST00000471250	HOXA10	P31260	410 aa	Predicted RBP	31.18	■■■□□ 2.58
U2AF1-208	ENST00000471250	ZSCAN25	Q6NSZ9	544 aa		31.18	■■■□□ 2.58
U2AF1-208	ENST00000471250	PRPF40B	Q6NWY9	871 aa	Known RBP	31.18	■■■□□ 2.58
U2AF1-208	ENST00000471250	RASEF	Q8IZ41	740 aa		31.18	■■■□□ 2.58
U2AF1-208	ENST00000471250	WTIP	A6NIX2	430 aa	Predicted RBP	31.17	■■■□□ 2.58
U2AF1-208	ENST00000471250	KCNJ4	P48050	445 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	BRIP1	Q9BX63	1249 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	PARP3	Q9Y6F1	533 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	MAST3	O60307	1309 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	MMP10	P09238	476 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	CAVIN4	Q5BKX8	364 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	CREB3L3	Q68CJ9	461 aa		31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	GNL3L	Q9NVN8	582 aa	Known RBP	31.16	■■■□□ 2.58
U2AF1-208	ENST00000471250	DOCK2	Q92608	1830 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	GYG1	P46976	350 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	NEK4	P51957	841 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	APPBP2	Q92624	585 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	OSBP2	Q969R2	916 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	CRAMP1	Q96RY5	1269 aa		31.15	■■■□□ 2.58
U2AF1-208	ENST00000471250	ADD2	P35612	726 aa		31.14	■■■□□ 2.58
U2AF1-208	ENST00000471250	FAM84B	Q96KN1	310 aa	Predicted RBP	31.14	■■■□□ 2.58
U2AF1-208	ENST00000471250	FBXO33	Q7Z6M2	555 aa		31.13	■■■□□ 2.57
U2AF1-208	ENST00000471250		M0R2C6	588 aa		31.13	■■■□□ 2.57
U2AF1-208	ENST00000471250	SLC27A2	O14975	620 aa		31.13	■■■□□ 2.57
U2AF1-208	ENST00000471250	BBOX1	O75936	387 aa		31.13	■■■□□ 2.57
U2AF1-208	ENST00000471250		U3KPZ7	1027 aa	Predicted RBP	31.13	■■■□□ 2.57
U2AF1-208	ENST00000471250	ZKSCAN1	P17029	563 aa	Predicted RBP	31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	UBE3C	Q15386	1083 aa		31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	WASHC4	Q2M389	1173 aa		31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	RNF20	Q5VTR2	975 aa		31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	DSCC1	Q9BVC3	393 aa		31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	LEMD3	Q9Y2U8	911 aa		31.12	■■■□□ 2.57
U2AF1-208	ENST00000471250	MSL1	Q68DK7	614 aa		31.11	■■■□□ 2.57
U2AF1-208	ENST00000471250	IDH1	O75874	414 aa	Known RBP	31.1	■■■□□ 2.57
U2AF1-208	ENST00000471250	SLC9C2	Q5TAH2	1124 aa		31.1	■■■□□ 2.57
U2AF1-208	ENST00000471250	DEFB132	Q7Z7B7	95 aa		31.1	■■■□□ 2.57
U2AF1-208	ENST00000471250	TM6SF1	Q9BZW5	370 aa		31.1	■■■□□ 2.57
U2AF1-208	ENST00000471250	IRS2	Q9Y4H2	1338 aa		31.1	■■■□□ 2.57
U2AF1-208	ENST00000471250	ZBTB22	O15209	634 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	MCM2	P49736	904 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	VPS37D	Q86XT2	251 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	XDH	P47989	1333 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	SEMA3E	O15041	775 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	KLRK1	P26718	216 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	TSGA10IP	Q3SY00	556 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	SPRYD3	Q8NCJ5	442 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	ANKIB1	Q9P2G1	1089 aa		31.09	■■■□□ 2.57
U2AF1-208	ENST00000471250	PDE6A	P16499	860 aa		31.08	■■■□□ 2.57
U2AF1-208	ENST00000471250	MAP3K12	Q12852	859 aa		31.08	■■■□□ 2.57
U2AF1-208	ENST00000471250	UPF3B	Q9BZI7	483 aa	Known RBP	31.08	■■■□□ 2.57
U2AF1-208	ENST00000471250	SLK	Q9H2G2	1235 aa	Predicted RBP	31.08	■■■□□ 2.57
U2AF1-208	ENST00000471250	DENND2A	Q9ULE3	1009 aa		31.08	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms