RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 BPIFA3Q9BQP9 254 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 TAF5LO75529 589 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 NOP2P46087 812 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 STK3Q13188 491 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 UTYO14607 1347 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 JAK2O60674 1132 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 EAF2Q96CJ1 260 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-204ENST00000470951 SASH1O94885 1247 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 CYP2C19P33261 490 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 SATB1Q01826 763 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 PFKFB2O60825 505 aa13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 V9GYY5 206 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-204ENST00000470951 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 TPM1P09493 284 aa13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
SRGAP3-204ENST00000470951 TPM4P67936 248 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 Q6ZUG5 572 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 NBPF11Q86T75 865 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 TAF6LQ9Y6J9 622 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
SRGAP3-204ENST00000470951 GRM8O00222 908 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 NLRP6P59044 892 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 ZRSR1Q15695 479 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 ABCC6O95255 1503 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 CLCN6P51797 869 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 SCRN1Q12765 414 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 NSUN7Q8NE18 718 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-204ENST00000470951 ATP5JP18859 108 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ZRANB2O95218 330 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 ME1P48163 572 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 LTN1O94822 1766 aa13.12□□□□□ -0.31
SRGAP3-204ENST00000470951 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms