RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 KLHL23Q8NBE8 558 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 FAM46AQ96IP4 442 aaKnown RBP6.52□□□□□ -1.37
HERC3-208ENST00000470815 SPACA7Q96KW9 195 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 FNDC3AQ9Y2H6 1198 aaKnown RBP6.52□□□□□ -1.37
HERC3-208ENST00000470815 SPINK2P20155 84 aa6.51□□□□□ -1.37
HERC3-208ENST00000470815 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
HERC3-208ENST00000470815 ATP11AP98196 1134 aa6.51□□□□□ -1.37
HERC3-208ENST00000470815 COL13A1Q5TAT6 717 aaPredicted RBP6.51□□□□□ -1.37
HERC3-208ENST00000470815 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
HERC3-208ENST00000470815 SAP130Q9H0E3 1048 aa6.51□□□□□ -1.37
HERC3-208ENST00000470815 TNFRSF10BO14763 440 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 GRIK1P39086 918 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 RNF43Q68DV7 783 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 DBNDD2Q9BQY9 259 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
HERC3-208ENST00000470815 OAS3Q9Y6K5 1087 aaKnown RBP6.5□□□□□ -1.37
HERC3-208ENST00000470815 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 FSCN2O14926 492 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 FAM26DQ5JW98 314 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
HERC3-208ENST00000470815 KIAA1211Q6ZU35 1233 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 TRAIPQ9BWF2 469 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
HERC3-208ENST00000470815 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 ZAP70P43403 619 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 DUOXA2Q1HG44 320 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 TXNDC11Q6PKC3 985 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 CAPN12Q6ZSI9 719 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 WNT8BQ93098 351 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 ADAM19Q9H013 955 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 RASSF4Q9H2L5 321 aa6.48□□□□□ -1.37
HERC3-208ENST00000470815 ABI2Q9NYB9 513 aaPredicted RBP6.48□□□□□ -1.37
HERC3-208ENST00000470815 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 BRD1O95696 1058 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 YBX3P16989 372 aaKnown RBP eCLIP6.47□□□□□ -1.37
HERC3-208ENST00000470815 TAL1P17542 331 aaPredicted RBP6.47□□□□□ -1.37
HERC3-208ENST00000470815 PTPRAP18433 802 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 EPHA1P21709 976 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 SCNN1AP37088 669 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
HERC3-208ENST00000470815 CLEC10AQ8IUN9 316 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 TRIM42Q8IWZ5 723 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
HERC3-208ENST00000470815 SEPT3Q9UH03 358 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 MTMR7Q9Y216 660 aa6.47□□□□□ -1.37
HERC3-208ENST00000470815 FAM177BA6PVY3 158 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 ADAM11O75078 769 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 ANKRD34AQ69YU3 496 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
HERC3-208ENST00000470815 ADAMTSL4Q6UY14 1074 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 FAM20CQ8IXL6 584 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 CEP120Q8N960 986 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 ABTB2Q8N961 1025 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 FAM83CQ9BQN1 747 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 CARD10Q9BWT7 1032 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 STIM2Q9P246 746 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 HIF3AQ9Y2N7 669 aa6.46□□□□□ -1.38
HERC3-208ENST00000470815 HMX2A2RU54 273 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 H3BRJ5 948 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 NPR3P17342 541 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 PIP4K2BP78356 416 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 TXNDC2Q86VQ3 553 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 GPR152Q8TDT2 470 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 OSGEPQ9NPF4 335 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 EGFL7Q9UHF1 273 aa6.45□□□□□ -1.38
HERC3-208ENST00000470815 GNEQ9Y223 722 aaKnown RBP6.45□□□□□ -1.38
HERC3-208ENST00000470815 ADAMTS4O75173 837 aa6.44□□□□□ -1.38
HERC3-208ENST00000470815 NCAPG2Q86XI2 1143 aa6.44□□□□□ -1.38
HERC3-208ENST00000470815 UBASH3BQ8TF42 649 aa6.44□□□□□ -1.38
HERC3-208ENST00000470815 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
HERC3-208ENST00000470815 POP1Q99575 1024 aaKnown RBP6.44□□□□□ -1.38
HERC3-208ENST00000470815 RNF208Q9H0X6 261 aa6.44□□□□□ -1.38
HERC3-208ENST00000470815 SH2B1Q9NRF2 756 aaPredicted RBP6.44□□□□□ -1.38
HERC3-208ENST00000470815 SART1O43290 800 aaKnown RBP6.43□□□□□ -1.38
HERC3-208ENST00000470815 WNT11O96014 354 aa6.43□□□□□ -1.38
HERC3-208ENST00000470815 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
HERC3-208ENST00000470815 CDC25BP30305 580 aa6.43□□□□□ -1.38
HERC3-208ENST00000470815 CABP4P57796 275 aa6.43□□□□□ -1.38
HERC3-208ENST00000470815 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
HERC3-208ENST00000470815 NAA30Q147X3 362 aaPredicted RBP6.43□□□□□ -1.38
HERC3-208ENST00000470815 GTF3C2Q8WUA4 911 aaPredicted RBP6.43□□□□□ -1.38
HERC3-208ENST00000470815 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
HERC3-208ENST00000470815 DDX3YO15523 660 aaKnown RBP6.42□□□□□ -1.38
HERC3-208ENST00000470815 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
HERC3-208ENST00000470815 BMP3P12645 472 aa6.42□□□□□ -1.38
HERC3-208ENST00000470815 PREPP48147 710 aa6.42□□□□□ -1.38
HERC3-208ENST00000470815 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
HERC3-208ENST00000470815 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
HERC3-208ENST00000470815 ELP3Q9H9T3 547 aa6.42□□□□□ -1.38
HERC3-208ENST00000470815 MEGF11A6BM72 1044 aa6.41□□□□□ -1.38
HERC3-208ENST00000470815 ZBTB39O15060 712 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms