RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CCDC180Q9P1Z9 1646 aa5.11□□□□□ -1.59
UBXN4-206ENST00000470687 FAM196BA6NMK8 535 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 FOXO3O43524 673 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 HOXA10P31260 410 aaPredicted RBP5.1□□□□□ -1.59
UBXN4-206ENST00000470687 FAM26DQ5JW98 314 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 LARP1Q6PKG0 1096 aaKnown RBP5.1□□□□□ -1.59
UBXN4-206ENST00000470687 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.1□□□□□ -1.59
UBXN4-206ENST00000470687 TREML1Q86YW5 311 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 CARD10Q9BWT7 1032 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 LRFN2Q9ULH4 789 aa5.1□□□□□ -1.59
UBXN4-206ENST00000470687 ADAM11O75078 769 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 C8AP07357 584 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 BMP3P12645 472 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 WEE1P30291 646 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 ATP11AP98196 1134 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 ECM1Q16610 540 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 DUOXA2Q1HG44 320 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 ADAMTSL4Q6UY14 1074 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 BEND4Q6ZU67 534 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 ANKMY2Q8IV38 441 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 POU5F2Q8N7G0 328 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 UBASH3BQ8TF42 649 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 FOXD4L4Q8WXT5 416 aaPredicted RBP5.09□□□□□ -1.59
UBXN4-206ENST00000470687 CCDC97Q96F63 343 aaPredicted RBP5.09□□□□□ -1.59
UBXN4-206ENST00000470687 LACRTQ9GZZ8 138 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 VRTNQ9H8Y1 702 aa5.09□□□□□ -1.59
UBXN4-206ENST00000470687 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 FSCN2O14926 492 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 DDX3YO15523 660 aaKnown RBP5.08□□□□□ -1.6
UBXN4-206ENST00000470687 CDC27P30260 824 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 PREPP48147 710 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 TRIP4Q15650 581 aaPredicted RBP5.08□□□□□ -1.6
UBXN4-206ENST00000470687 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 COL13A1Q5TAT6 717 aaPredicted RBP5.08□□□□□ -1.6
UBXN4-206ENST00000470687 CBLL1Q75N03 491 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 NLRP13Q86W25 1043 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 KLHL23Q8NBE8 558 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 VTI1AQ96AJ9 217 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 KCNF1Q9H3M0 494 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 PIM2Q9P1W9 311 aa5.08□□□□□ -1.6
UBXN4-206ENST00000470687 NOVA2Q9UNW9 492 aaKnown RBP5.08□□□□□ -1.6
UBXN4-206ENST00000470687 SMNDC1O75940 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBXN4-206ENST00000470687 CDC25BP30305 580 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 CEP135Q66GS9 1140 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 ANKRD34AQ69YU3 496 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 OR13H1Q8NG92 308 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 COL26A1Q96A83 441 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 ANGEL1Q9UNK9 670 aaKnown RBP5.07□□□□□ -1.6
UBXN4-206ENST00000470687 HIF3AQ9Y2N7 669 aa5.07□□□□□ -1.6
UBXN4-206ENST00000470687 SART1O43290 800 aaKnown RBP5.06□□□□□ -1.6
UBXN4-206ENST00000470687 EPHA1P21709 976 aa5.06□□□□□ -1.6
UBXN4-206ENST00000470687 FAM117BQ6P1L5 589 aa5.06□□□□□ -1.6
UBXN4-206ENST00000470687 NFXL1Q6ZNB6 911 aa5.06□□□□□ -1.6
UBXN4-206ENST00000470687 ASIC4Q96FT7 647 aa5.06□□□□□ -1.6
UBXN4-206ENST00000470687 MFSD14AQ96MC6 490 aa5.06□□□□□ -1.6
UBXN4-206ENST00000470687 PPP1R15AO75807 674 aaPredicted RBP5.05□□□□□ -1.6
UBXN4-206ENST00000470687 PRNPP04156 253 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 ITGB5P18084 799 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 HYAL2Q12891 473 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 COX20Q5RI15 118 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 KLHDC7BQ96G42 594 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 SPACA7Q96KW9 195 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 PRIMPOLQ96LW4 560 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 RASSF4Q9H2L5 321 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 SEC31BQ9NQW1 1179 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 CCDC39Q9UFE4 941 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 ABCC9O60706 1549 aa5.05□□□□□ -1.6
UBXN4-206ENST00000470687 KIF4AO95239 1232 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 FOSL1P15407 271 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 SSFA2P28290 1259 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 FKBP5Q13451 457 aaPredicted RBP5.04□□□□□ -1.6
UBXN4-206ENST00000470687 NOM1Q5C9Z4 860 aaKnown RBP5.04□□□□□ -1.6
UBXN4-206ENST00000470687 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 ETFBKMTQ8IXQ9 262 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 CLP1Q92989 425 aaKnown RBP5.04□□□□□ -1.6
UBXN4-206ENST00000470687 RNF208Q9H0X6 261 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBXN4-206ENST00000470687 SH2B1Q9NRF2 756 aaPredicted RBP5.04□□□□□ -1.6
UBXN4-206ENST00000470687 LEMD3Q9Y2U8 911 aa5.04□□□□□ -1.6
UBXN4-206ENST00000470687 UBAP1LF5GYI3 381 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 F13BP05160 661 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 JUNBP17275 347 aaPredicted RBP5.03□□□□□ -1.6
UBXN4-206ENST00000470687 MAP4P27816 1152 aaKnown RBP5.03□□□□□ -1.6
UBXN4-206ENST00000470687 COL19A1Q14993 1142 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 CPSF6Q16630 551 aaKnown RBP eCLIP5.03□□□□□ -1.6
UBXN4-206ENST00000470687 FDX2Q6P4F2 183 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 GIMAP7Q8NHV1 300 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 FBXL18Q96ME1 805 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 SAP130Q9H0E3 1048 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 ATG3Q9NT62 314 aa5.03□□□□□ -1.6
UBXN4-206ENST00000470687 ACIN1Q9UKV3 1341 aaKnown RBP5.02□□□□□ -1.61
UBXN4-206ENST00000470687 H3BRJ5 948 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 GAS2O43903 313 aaKnown RBP5.02□□□□□ -1.61
UBXN4-206ENST00000470687 PTPRAP18433 802 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 PIP4K2BP78356 416 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 SGO2Q562F6 1265 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 TXNDC2Q86VQ3 553 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 TP53INP2Q8IXH6 220 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 FBXL6Q8N531 539 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms