RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CNTNAP1P78357 1384 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 KLRK1P26718 216 aa17.75■□□□□ 0.43
COMMD3-208ENST00000470045 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
COMMD3-208ENST00000470045 RSBN1LQ6PCB5 846 aaPredicted RBP17.75■□□□□ 0.43
COMMD3-208ENST00000470045 C15orf52Q6ZUT6 534 aaKnown RBP17.75■□□□□ 0.43
COMMD3-208ENST00000470045 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
COMMD3-208ENST00000470045 GMLQ99445 158 aa17.75■□□□□ 0.43
COMMD3-208ENST00000470045 COA1Q9GZY4 146 aa17.75■□□□□ 0.43
COMMD3-208ENST00000470045 POLR2AP24928 1970 aaKnown RBP17.74■□□□□ 0.43
COMMD3-208ENST00000470045 EGFRP00533 1210 aa17.74■□□□□ 0.43
COMMD3-208ENST00000470045 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
COMMD3-208ENST00000470045 SAMD7Q7Z3H4 446 aa17.74■□□□□ 0.43
COMMD3-208ENST00000470045 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
COMMD3-208ENST00000470045 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
COMMD3-208ENST00000470045 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
COMMD3-208ENST00000470045 THSD7BQ9C0I4 1608 aa17.73■□□□□ 0.43
COMMD3-208ENST00000470045 USP17L3A6NCW0 530 aa17.73■□□□□ 0.43
COMMD3-208ENST00000470045 USP17L4A6NCW7 530 aa17.73■□□□□ 0.43
COMMD3-208ENST00000470045 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
COMMD3-208ENST00000470045 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
COMMD3-208ENST00000470045 USP17L1Q7RTZ2 530 aa17.73■□□□□ 0.43
COMMD3-208ENST00000470045 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
COMMD3-208ENST00000470045 TRAF5O00463 557 aa17.72■□□□□ 0.43
COMMD3-208ENST00000470045 TBC1D10BQ4KMP7 808 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-208ENST00000470045 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
COMMD3-208ENST00000470045 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
COMMD3-208ENST00000470045 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
COMMD3-208ENST00000470045 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
COMMD3-208ENST00000470045 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
COMMD3-208ENST00000470045 RASSF10A6NK89 507 aa17.71■□□□□ 0.43
COMMD3-208ENST00000470045 TAF5LO75529 589 aa17.71■□□□□ 0.43
COMMD3-208ENST00000470045 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.43
COMMD3-208ENST00000470045 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
COMMD3-208ENST00000470045 STRIP1Q5VSL9 837 aa17.71■□□□□ 0.43
COMMD3-208ENST00000470045 HELBQ8NG08 1087 aaPredicted RBP17.71■□□□□ 0.43
COMMD3-208ENST00000470045 GLIS2Q9BZE0 524 aaPredicted RBP17.71■□□□□ 0.43
COMMD3-208ENST00000470045 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
COMMD3-208ENST00000470045 SNAP23O00161 211 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 KCNJ4P48050 445 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 CST9Q5W186 159 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 CDC37L1Q7L3B6 337 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
COMMD3-208ENST00000470045 ARAP2Q8WZ64 1704 aa17.69■□□□□ 0.42
COMMD3-208ENST00000470045 PCNTO95613 3336 aa17.69■□□□□ 0.42
COMMD3-208ENST00000470045 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
COMMD3-208ENST00000470045 ARHGAP45Q92619 1136 aa17.69■□□□□ 0.42
COMMD3-208ENST00000470045 PUS3Q9BZE2 481 aaKnown RBP17.69■□□□□ 0.42
COMMD3-208ENST00000470045 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
COMMD3-208ENST00000470045 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
COMMD3-208ENST00000470045 USP17L8P0C7I0 530 aa17.68■□□□□ 0.42
COMMD3-208ENST00000470045 IL1R1P14778 569 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 VEGFBP49765 207 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 UBE4AQ14139 1066 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
COMMD3-208ENST00000470045 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
COMMD3-208ENST00000470045 MMP14P50281 582 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 DEFB115Q30KQ5 88 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 ZNF804AQ7Z570 1209 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 MXD3Q9BW11 206 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 GGA3Q9NZ52 723 aa17.66■□□□□ 0.42
COMMD3-208ENST00000470045 ABT1Q9ULW3 272 aaKnown RBP17.66■□□□□ 0.42
COMMD3-208ENST00000470045 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
COMMD3-208ENST00000470045 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
COMMD3-208ENST00000470045 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
COMMD3-208ENST00000470045 RFX5P48382 616 aaPredicted RBP17.65■□□□□ 0.42
COMMD3-208ENST00000470045 GTF2IP78347 998 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 INTS3Q68E01 1043 aaKnown RBP17.65■□□□□ 0.42
COMMD3-208ENST00000470045 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 DCPSQ96C86 337 aaKnown RBP17.65■□□□□ 0.42
COMMD3-208ENST00000470045 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 PITPNM2Q9BZ72 1349 aa17.65■□□□□ 0.42
COMMD3-208ENST00000470045 PLIN1O60240 522 aa17.64■□□□□ 0.41
COMMD3-208ENST00000470045 HSPA1AP0DMV8 641 aaKnown RBP17.64■□□□□ 0.41
COMMD3-208ENST00000470045 HSPA1BP0DMV9 641 aaKnown RBP17.64■□□□□ 0.41
COMMD3-208ENST00000470045 LRRC24Q50LG9 513 aa17.64■□□□□ 0.41
COMMD3-208ENST00000470045 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
COMMD3-208ENST00000470045 ADM5C9JUS6 153 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
COMMD3-208ENST00000470045 SCARF1Q14162 830 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 CERS5Q8N5B7 392 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 KLHDC4Q8TBB5 520 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 HHIPL1Q96JK4 782 aa17.63■□□□□ 0.41
COMMD3-208ENST00000470045 BCAR3O75815 825 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 TRIM27P14373 513 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
COMMD3-208ENST00000470045 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
COMMD3-208ENST00000470045 DLK2Q6UY11 383 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 OGFOD1Q8N543 542 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 MEIS3Q99687 375 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
COMMD3-208ENST00000470045 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms