RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 ADAMTS2O95450 1211 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 USP17L7P0C7H9 530 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 ACDQ96AP0 544 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 PBX4Q9BYU1 374 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 FAM8A1Q9UBU6 413 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
VPS8-220ENST00000469713 ELOA3CA0A087WX78 387 aaPredicted RBP6.82□□□□□ -1.32
VPS8-220ENST00000469713 ELOA3DA6NLF2 546 aaPredicted RBP6.82□□□□□ -1.32
VPS8-220ENST00000469713 METTL12A8MUP2 240 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 FCGRTP55899 365 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 ELOA3BQ3SY89 546 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 PRPF40BQ6NWY9 871 aaKnown RBP6.82□□□□□ -1.32
VPS8-220ENST00000469713 SLCO4C1Q6ZQN7 724 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 ELOA3Q8NG57 546 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 SRCIN1Q9C0H9 1055 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 ABCB6Q9NP58 842 aa6.82□□□□□ -1.32
VPS8-220ENST00000469713 GDF2Q9UK05 429 aaPredicted RBP6.82□□□□□ -1.32
VPS8-220ENST00000469713 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 PDE2AO00408 941 aaPredicted RBP6.81□□□□□ -1.32
VPS8-220ENST00000469713 TCF3P15923 654 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 GRIA4P48058 902 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 GSK3AP49840 483 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
VPS8-220ENST00000469713 TMEM102Q8N9M5 508 aaPredicted RBP6.81□□□□□ -1.32
VPS8-220ENST00000469713 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 LPIN3Q9BQK8 851 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
VPS8-220ENST00000469713 SMG9Q9H0W8 520 aaKnown RBP6.81□□□□□ -1.32
VPS8-220ENST00000469713 RBSNQ9H1K0 784 aa6.81□□□□□ -1.32
VPS8-220ENST00000469713 SCAMP3O14828 347 aaKnown RBP6.8□□□□□ -1.32
VPS8-220ENST00000469713 EPXP11678 715 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 GSTT1P30711 240 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 SPRED3Q2MJR0 410 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 CEP135Q66GS9 1140 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 PSAPL1Q6NUJ1 521 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 ADAMTSL4Q6UY14 1074 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 POP1Q99575 1024 aaKnown RBP6.8□□□□□ -1.32
VPS8-220ENST00000469713 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 STARD13Q9Y3M8 1113 aa6.8□□□□□ -1.32
VPS8-220ENST00000469713 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
VPS8-220ENST00000469713 ALAS2P22557 587 aa6.79□□□□□ -1.32
VPS8-220ENST00000469713 HDLBPQ00341 1268 aaKnown RBP6.79□□□□□ -1.32
VPS8-220ENST00000469713 KCNMA1Q12791 1236 aa6.79□□□□□ -1.32
VPS8-220ENST00000469713 DTHD1Q6ZMT9 781 aa6.79□□□□□ -1.32
VPS8-220ENST00000469713 NUDT8Q8WV74 236 aa6.79□□□□□ -1.32
VPS8-220ENST00000469713 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
VPS8-220ENST00000469713 A0A096LPE4 126 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 A0A1W2PPZ6 126 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 SLURP2P0DP57 97 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 FANCCQ00597 558 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 LACRTQ9GZZ8 138 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 FRRS1LQ9P0K9 344 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 AKAP2Q9Y2D5 859 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 USP31Q70CQ4 1352 aa6.78□□□□□ -1.32
VPS8-220ENST00000469713 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
VPS8-220ENST00000469713 ALBP02768 609 aa6.77□□□□□ -1.33
VPS8-220ENST00000469713 ITPKAP23677 461 aa6.77□□□□□ -1.33
VPS8-220ENST00000469713 ZNF76P36508 570 aa6.77□□□□□ -1.33
VPS8-220ENST00000469713 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
VPS8-220ENST00000469713 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
VPS8-220ENST00000469713 MUC3BQ9H195 1237 aa6.77□□□□□ -1.33
VPS8-220ENST00000469713 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
VPS8-220ENST00000469713 SHISA8B8ZZ34 492 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 OIP5O43482 229 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 FBXO24O75426 580 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 BCRP11274 1271 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 XRCC5P13010 732 aaKnown RBP6.76□□□□□ -1.33
VPS8-220ENST00000469713 PTPRAP18433 802 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 GDF6Q6KF10 455 aaPredicted RBP6.76□□□□□ -1.33
VPS8-220ENST00000469713 LYPD4Q6UWN0 246 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 C20orf204Q6ZNR8 217 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 WHAMMQ8TF30 809 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
VPS8-220ENST00000469713 JPH1Q9HDC5 661 aaPredicted RBP6.76□□□□□ -1.33
VPS8-220ENST00000469713 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
VPS8-220ENST00000469713 CELA2BP08218 269 aaPredicted RBP6.75□□□□□ -1.33
VPS8-220ENST00000469713 ST13P50502 369 aaKnown RBP6.75□□□□□ -1.33
VPS8-220ENST00000469713 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
VPS8-220ENST00000469713 GRIK5Q16478 980 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 CHSY3Q70JA7 882 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
VPS8-220ENST00000469713 BSNDQ8WZ55 320 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 TTC9Q92623 222 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 RNF34Q969K3 372 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 BTBD6Q96KE9 485 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 ADAM19Q9H013 955 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms