RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 PRR5LQ6MZQ0 368 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 DDX60Q8IY21 1712 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-215ENST00000469653 UTYO14607 1347 aa11.96□□□□□ -0.49
SEMA4D-215ENST00000469653 CASP7P55210 303 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 TTC22Q5TAA0 569 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 TMTC2Q8N394 836 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 SPON1Q9HCB6 807 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 TMEM63CQ9P1W3 806 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 MYH3P11055 1940 aa11.96□□□□□ -0.5
SEMA4D-215ENST00000469653 IRS4O14654 1257 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 PTGER2P43116 358 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 ST5P78524 1137 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 GNAI3P08754 354 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 LAMB2P55268 1798 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 SETQ01105 290 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 ABCC12Q96J65 1359 aa11.95□□□□□ -0.5
SEMA4D-215ENST00000469653 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 CDHR2Q9BYE9 1310 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 UQCRHLA0A096LP55 91 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 UQCRHP07919 91 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 PRDM4Q9UKN5 801 aa11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-215ENST00000469653 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 SYCE3A1L190 88 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 SLC10A5Q5PT55 438 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 PDE8AO60658 829 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 GNAI2P04899 355 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 SDSP20132 328 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SEMA4D-215ENST00000469653 EPHA10Q5JZY3 1008 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 FOXO4P98177 505 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 NLRP3Q96P20 1036 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 PLA2G12BQ9BX93 195 aa11.92□□□□□ -0.5
SEMA4D-215ENST00000469653 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 SGSM3Q96HU1 749 aa11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 SRCAPQ6ZRS2 3230 aa11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 CCDC85AQ96PX6 553 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 CTSWP56202 376 aa11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 C10orf71Q711Q0 1435 aa11.91□□□□□ -0.5
SEMA4D-215ENST00000469653 PDE6BP35913 854 aa11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 TAF1P21675 1872 aa11.9□□□□□ -0.5
SEMA4D-215ENST00000469653 TTLL11Q8NHH1 800 aa11.9□□□□□ -0.51
SEMA4D-215ENST00000469653 ST18O60284 1047 aa11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 MAP7D2Q96T17 732 aa11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 CSF1RP07333 972 aa11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 RABL6Q3YEC7 729 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 CCDC152Q4G0S7 254 aa11.89□□□□□ -0.51
SEMA4D-215ENST00000469653 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 MCM5P33992 734 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 ZNF622Q969S3 477 aaKnown RBP eCLIP11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 GREM2Q9H772 168 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 DYNC1I1O14576 645 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 CRY2Q49AN0 593 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 RILPL2Q969X0 211 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 CACNA1SQ13698 1873 aa11.88□□□□□ -0.51
SEMA4D-215ENST00000469653 H0YIN7 160 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 CHRNA5P30532 468 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 FOSBP53539 338 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 CCDC39Q9UFE4 941 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 TRIM6-TRIM34B2RNG4 842 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 SRGNP10124 158 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 ITGA6P23229 1130 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 SASS6Q6UVJ0 657 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
SEMA4D-215ENST00000469653 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms