RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ABCA5Q8WWZ7 1642 aa8.6□□□□□ -1.03
VPS8-219ENST00000469479 SPINK2P20155 84 aa8.59□□□□□ -1.03
VPS8-219ENST00000469479 RNF43Q68DV7 783 aa8.59□□□□□ -1.03
VPS8-219ENST00000469479 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
VPS8-219ENST00000469479 USP20Q9Y2K6 914 aa8.59□□□□□ -1.03
VPS8-219ENST00000469479 DIP2BQ9P265 1576 aa8.59□□□□□ -1.03
VPS8-219ENST00000469479 ADAMTS12P58397 1594 aa8.58□□□□□ -1.04
VPS8-219ENST00000469479 FHAD1B1AJZ9 1412 aa8.58□□□□□ -1.04
VPS8-219ENST00000469479 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
VPS8-219ENST00000469479 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
VPS8-219ENST00000469479 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
VPS8-219ENST00000469479 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
VPS8-219ENST00000469479 KCNMB2Q9Y691 235 aa8.58□□□□□ -1.04
VPS8-219ENST00000469479 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L21D6R901 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 WNT11O96014 354 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 GLMNQ92990 594 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 UTP4Q969X6 686 aaKnown RBP8.57□□□□□ -1.04
VPS8-219ENST00000469479 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
VPS8-219ENST00000469479 ACAD11Q709F0 780 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 NLRP13Q86W25 1043 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 FBXO41Q8TF61 875 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
VPS8-219ENST00000469479 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 VRTNQ9H8Y1 702 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 LRFN2Q9ULH4 789 aa8.56□□□□□ -1.04
VPS8-219ENST00000469479 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 SPACA7Q96KW9 195 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
VPS8-219ENST00000469479 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
VPS8-219ENST00000469479 CLEC10AQ8IUN9 316 aa8.54□□□□□ -1.04
VPS8-219ENST00000469479 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
VPS8-219ENST00000469479 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
VPS8-219ENST00000469479 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
VPS8-219ENST00000469479 HECW2Q9P2P5 1572 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 PRR19A6NJB7 356 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS8-219ENST00000469479 WISP1O95388 367 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 CDC27P30260 824 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 HYAL2Q12891 473 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 ERICH3Q5RHP9 1530 aa8.53□□□□□ -1.04
VPS8-219ENST00000469479 HMX2A2RU54 273 aa8.52□□□□□ -1.05
VPS8-219ENST00000469479 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
VPS8-219ENST00000469479 OR13H1Q8NG92 308 aa8.52□□□□□ -1.05
VPS8-219ENST00000469479 ARXQ96QS3 562 aa8.52□□□□□ -1.05
VPS8-219ENST00000469479 FAM83CQ9BQN1 747 aa8.52□□□□□ -1.05
VPS8-219ENST00000469479 COX20Q5RI15 118 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 CEP135Q66GS9 1140 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 OGFOD2Q6N063 350 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 KCNK4Q9NYG8 393 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 ADGRE2Q9UHX3 823 aa8.51□□□□□ -1.05
VPS8-219ENST00000469479 FSCN2O14926 492 aa8.5□□□□□ -1.05
VPS8-219ENST00000469479 FAM20CQ8IXL6 584 aa8.5□□□□□ -1.05
VPS8-219ENST00000469479 LACRTQ9GZZ8 138 aa8.5□□□□□ -1.05
VPS8-219ENST00000469479 FAM177BA6PVY3 158 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
VPS8-219ENST00000469479 TXNDC11Q6PKC3 985 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 CALR3Q96L12 384 aaKnown RBP8.49□□□□□ -1.05
VPS8-219ENST00000469479 KRTAP4-11Q9BYQ6 195 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 ADCY10Q96PN6 1610 aa8.49□□□□□ -1.05
VPS8-219ENST00000469479 TM4SF5O14894 197 aa8.48□□□□□ -1.05
VPS8-219ENST00000469479 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 C8AP07357 584 aa8.48□□□□□ -1.05
VPS8-219ENST00000469479 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 ANKRD34AQ69YU3 496 aa8.48□□□□□ -1.05
VPS8-219ENST00000469479 BEND4Q6ZU67 534 aa8.48□□□□□ -1.05
VPS8-219ENST00000469479 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 SHKBP1Q8TBC3 707 aa8.48□□□□□ -1.05
VPS8-219ENST00000469479 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
VPS8-219ENST00000469479 PLB1Q6P1J6 1458 aa8.47□□□□□ -1.05
VPS8-219ENST00000469479 ATP11AP98196 1134 aa8.47□□□□□ -1.05
VPS8-219ENST00000469479 PROSER2Q86WR7 435 aaPredicted RBP8.47□□□□□ -1.05
VPS8-219ENST00000469479 ETFBKMTQ8IXQ9 262 aa8.47□□□□□ -1.05
VPS8-219ENST00000469479 CARD10Q9BWT7 1032 aa8.47□□□□□ -1.05
VPS8-219ENST00000469479 HIF3AQ9Y2N7 669 aa8.47□□□□□ -1.05
VPS8-219ENST00000469479 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms