RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SYTL4Q96C24 671 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 USP42Q9H9J4 1324 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 PPP2R2CQ9Y2T4 447 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 ATP7BP35670 1465 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 IKBKBO14920 756 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 SHOX2O60902 331 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 AARSP49588 968 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 ENGASEQ8NFI3 743 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 EPC1Q9H2F5 836 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 CHL1O00533 1208 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 GNG11P61952 73 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 PRPF38AQ8NAV1 312 aaKnown RBP10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 KAT2BQ92831 832 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 CPA1P15085 419 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 IRX1P78414 480 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 CASP8Q14790 479 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 ADCK5Q3MIX3 580 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 MAP9Q49MG5 647 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 KCNV1Q6PIU1 500 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 FAM204AQ9H8W3 233 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
SMARCE1-207ENST00000469334 EBAG9O00559 213 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 CUTAO60888 179 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 IL13P35225 146 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 NECTIN1Q15223 517 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 FMNL3Q8IVF7 1028 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
SMARCE1-207ENST00000469334 EXOC5O00471 708 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 HMOX1P09601 288 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 GPTP24298 496 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 ELF1P32519 619 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 FANCCQ00597 558 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 SPATS2Q86XZ4 545 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 DHX58Q96C10 678 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 WDR24Q96S15 920 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 BSDC1Q9NW68 430 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 PNMA6EA0A0J9YXQ4 647 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 STX10O60499 249 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 MCM3P25205 808 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 NLRP12P59046 1061 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 PPP2R5AQ15172 486 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 NAA16Q6N069 864 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 TMEM139Q8IV31 216 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 VSTM4Q8IW00 320 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 ABCB6Q9NP58 842 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 MCM8Q9UJA3 840 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 CDC23Q9UJX2 597 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 FAM169AQ9Y6X4 670 aa10.37□□□□□ -0.75
SMARCE1-207ENST00000469334 A0A1W2PQ27 194 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 A0A1W2PQ64 194 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 A0A1W2PQD8 194 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 A6NNZ2 444 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 H3BQV1 296 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 HIP1O00291 1037 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 CHUKO15111 745 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 RNF40O75150 1001 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 GLRX3O76003 335 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 INPP5BP32019 993 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 RDXP35241 583 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 LIG3P49916 1009 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 TUBB8Q3ZCM7 444 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 BLOC1S2Q6QNY1 142 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 CWC27Q6UX04 472 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 KIAA1468Q9P260 1216 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 WDHD1O75717 1129 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 PRPF6O94906 941 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 RPS6KB1P23443 525 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 CRYMQ14894 314 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 CREB3L3Q68CJ9 461 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 TMEM132EQ6IEE7 984 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 WDR93Q6P2C0 686 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-207ENST00000469334 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms