RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 CLN3Q13286 438 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 ARID5BQ14865 1188 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 BRDTQ58F21 947 aaPredicted RBP6.6□□□□□ -1.35
SMG5-202ENST00000468993 HSP90AB4PQ58FF6 505 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 DALRD3Q5D0E6 543 aaKnown RBP6.6□□□□□ -1.35
SMG5-202ENST00000468993 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
SMG5-202ENST00000468993 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 OR6P1Q8NGX9 317 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 STAC3Q96MF2 364 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 ELP3Q9H9T3 547 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 PARP3Q9Y6F1 533 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 GAPVD1Q14C86 1478 aa6.6□□□□□ -1.35
SMG5-202ENST00000468993 ALG1L2C9J202 215 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 KCNQ2O43526 872 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 PPFIA4O75335 1185 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
SMG5-202ENST00000468993 PMLP29590 882 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 CNGA1P29973 690 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 GNALP38405 381 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 EIF6P56537 245 aaKnown RBP6.59□□□□□ -1.35
SMG5-202ENST00000468993 LMNB2Q03252 620 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 FAM160A1Q05DH4 1040 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 PRPF40BQ6NWY9 871 aaKnown RBP6.59□□□□□ -1.35
SMG5-202ENST00000468993 CCDC81Q6ZN84 652 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 GLIS3Q8NEA6 775 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 MTRQ99707 1265 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 ST7Q9NRC1 585 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 COMMD10Q9Y6G5 202 aa6.59□□□□□ -1.35
SMG5-202ENST00000468993 URB2Q14146 1524 aaKnown RBP6.59□□□□□ -1.35
SMG5-202ENST00000468993 UBAP1LF5GYI3 381 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 PLIN1O60240 522 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 TRIM37O94972 964 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 S1PR4O95977 384 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 PF4P02776 101 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 GIPRP48546 466 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 LIG3P49916 1009 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 IDH3AP50213 366 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 ARSDP51689 593 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 EPHB1P54762 984 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 CENPCQ03188 943 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 TRIM32Q13049 653 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
SMG5-202ENST00000468993 FXNQ16595 210 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 CTC1Q2NKJ3 1217 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 NYAP1Q6ZVC0 841 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 JAMLQ86YT9 394 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 MPNDQ8N594 471 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 GOLM1Q8NBJ4 401 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 RHPN1Q8TCX5 695 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 CHAC2Q8WUX2 184 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 TMEM63CQ9P1W3 806 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 PPT2Q9UMR5 302 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 GPC6Q9Y625 555 aaPredicted RBP6.58□□□□□ -1.36
SMG5-202ENST00000468993 PTCH2Q9Y6C5 1203 aa6.58□□□□□ -1.36
SMG5-202ENST00000468993 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 EREGO14944 169 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 CAND2O75155 1236 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 ASMTLO95671 621 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 ADH1AP07327 375 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 CRKP46108 304 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 VEGFBP49765 207 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 EVA1CP58658 441 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 CAMK2GQ13555 558 aaPredicted RBP6.57□□□□□ -1.36
SMG5-202ENST00000468993 MAP3K11Q16584 847 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 NFE2Q16621 373 aaPredicted RBP6.57□□□□□ -1.36
SMG5-202ENST00000468993 MAP9Q49MG5 647 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 SPTY2D1Q68D10 685 aaPredicted RBP6.57□□□□□ -1.36
SMG5-202ENST00000468993 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
SMG5-202ENST00000468993 PMEPA1Q969W9 287 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 CRBNQ96SW2 442 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 APBA2Q99767 749 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 LRRC3Q9BY71 257 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 RBSNQ9H1K0 784 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 EHD4Q9H223 541 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 FANCD2Q9BXW9 1451 aa6.57□□□□□ -1.36
SMG5-202ENST00000468993 POTEB2H3BUK9 544 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 TSPAN6O43657 245 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 POU3F3P20264 500 aaPredicted RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 TXLNAP40222 546 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 STAT3P40763 770 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 LSM11P83369 360 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG5-202ENST00000468993 SKOR1P84550 965 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 NR5A1Q13285 461 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 OS9Q13438 667 aaPredicted RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 HDAC1Q13547 482 aaPredicted RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 TM4SF20Q53R12 229 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 THNSL2Q86YJ6 484 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 RAVER1Q8IY67 606 aaKnown RBP6.56□□□□□ -1.36
SMG5-202ENST00000468993 EHBP1Q8NDI1 1231 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 RHBDD1Q8TEB9 315 aa6.56□□□□□ -1.36
SMG5-202ENST00000468993 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms