RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MINPP1Q9UNW1 487 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
BRCA1-208ENST00000468300 MCAMP43121 646 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 PUM3Q15397 648 aaKnown RBP10.03□□□□□ -0.8
BRCA1-208ENST00000468300 SLC15A2Q16348 729 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 PI16Q6UXB8 463 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 PDGFDQ9GZP0 370 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-208ENST00000468300 LSG1Q9H089 658 aaKnown RBP10.03□□□□□ -0.8
BRCA1-208ENST00000468300 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
BRCA1-208ENST00000468300 COL1A1P02452 1464 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-208ENST00000468300 ARID4AP29374 1257 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-208ENST00000468300 ILDR1Q86SU0 546 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-208ENST00000468300 LPIN2Q92539 896 aa10.02□□□□□ -0.8
BRCA1-208ENST00000468300 MPHOSPH8Q99549 860 aa10.02□□□□□ -0.8
BRCA1-208ENST00000468300 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 PHKA1P46020 1223 aa10.02□□□□□ -0.81
BRCA1-208ENST00000468300 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 CWC27Q6UX04 472 aaKnown RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
BRCA1-208ENST00000468300 SECISBP2LQ93073 1101 aaKnown RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 CDC5LQ99459 802 aaKnown RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 GTF2E1P29083 439 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 CCDC102BQ68D86 513 aa10.02□□□□□ -0.81
BRCA1-208ENST00000468300 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
BRCA1-208ENST00000468300 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.81
BRCA1-208ENST00000468300 CD2BP2O95400 341 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 PTH1RQ03431 593 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 PALD1Q9ULE6 856 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 ZNF804BA4D1E1 1349 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 KLRK1P26718 216 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 ZAP70P43403 619 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 CASC1Q6TDU7 716 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 FLAD1Q8NFF5 587 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 CWC22Q9HCG8 908 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 GOLIM4O00461 696 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 CYP2E1P05181 493 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 IFIT1P09914 478 aaKnown RBP10.01□□□□□ -0.81
BRCA1-208ENST00000468300 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
BRCA1-208ENST00000468300 CACNA1SQ13698 1873 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 HOXA10P31260 410 aaPredicted RBP10□□□□□ -0.81
BRCA1-208ENST00000468300 SLC4A3P48751 1232 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 GRAPQ13588 217 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
BRCA1-208ENST00000468300 SEC62Q99442 399 aaKnown RBP10□□□□□ -0.81
BRCA1-208ENST00000468300 DUOX1Q9NRD9 1551 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 MYH13Q9UKX3 1938 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 RAD50Q92878 1312 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 REC8O95072 547 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 BCAMP50895 628 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 MSL1Q68DK7 614 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 FSD1Q9BTV5 496 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
BRCA1-208ENST00000468300 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 MMP10P09238 476 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 CCDC158Q5M9N0 1113 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 PSMD1Q99460 953 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 HMG20BQ9P0W2 317 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 KIF13BQ9NQT8 1826 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 FOXP2O15409 715 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 EPB41L2O43491 1005 aaKnown RBP9.99□□□□□ -0.81
BRCA1-208ENST00000468300 HSPA4P34932 840 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 RASGRF1Q13972 1273 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 BBXQ8WY36 941 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-208ENST00000468300 KCNB2Q92953 911 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
BRCA1-208ENST00000468300 ZBTB22O15209 634 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 ST5P78524 1137 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 TXNRD3Q86VQ6 643 aa9.99□□□□□ -0.81
BRCA1-208ENST00000468300 SLC5A1P13866 664 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 UBE4AQ14139 1066 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 ANO2Q9NQ90 1003 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 DIAPH3Q9NSV4 1193 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 COL9A3Q14050 684 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-208ENST00000468300 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 MAP4K1Q92918 833 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 FAM84BQ96KN1 310 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-208ENST00000468300 BRIP1Q9BX63 1249 aa9.98□□□□□ -0.81
BRCA1-208ENST00000468300 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-208ENST00000468300 TCRBV5S4A2TA0A5A2 114 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 SRGNP10124 158 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 GYG1P46976 350 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 FKBP4Q02790 459 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCA1-208ENST00000468300 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 DDRGK1Q96HY6 314 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 LAMA4Q16363 1823 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms