RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 A0A1W2PRG0 241 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 NDC80O14777 642 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
HPS4-209ENST00000466781 HAND2P61296 217 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 SPECC1LQ69YQ0 1117 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 TMC6Q7Z403 805 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 VEZTQ9HBM0 779 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 DDX19AQ9NUU7 478 aaKnown RBP9.94□□□□□ -0.82
HPS4-209ENST00000466781 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
HPS4-209ENST00000466781 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 GJB2P29033 226 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 HEATR3Q7Z4Q2 680 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 CCDC117Q8IWD4 279 aaPredicted RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 GCC2Q8IWJ2 1684 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 MCM4P33991 863 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 MTHFSDQ2M296 383 aaKnown RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 STX8Q9UNK0 236 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 CYP7A1P22680 504 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 GSDMDP57764 484 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 BIN2Q9UBW5 565 aaPredicted RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 IL16Q14005 1332 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 LTKP29376 864 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 STAT6P42226 847 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 JDP2Q8WYK2 163 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 BACH2Q9BYV9 841 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 KIF1BO60333 1816 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 NBPF7P0C2Y1 421 aaPredicted RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 CALM1P0DP23 149 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 CALM2P0DP24 149 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 CALM3P0DP25 149 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 UBE3BQ7Z3V4 1068 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 IQCGQ9H095 443 aaKnown RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 ORC3Q9UBD5 711 aaPredicted RBP9.93□□□□□ -0.82
HPS4-209ENST00000466781 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
HPS4-209ENST00000466781 RXRBP28702 533 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 CCDC155Q8N6L0 562 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 CEP112Q8N8E3 955 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 QTRT2Q9H974 415 aaKnown RBP9.92□□□□□ -0.82
HPS4-209ENST00000466781 ECHDC1Q9NTX5 307 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 RASAL2Q9UJF2 1139 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 BRPF3Q9ULD4 1205 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 SLU7O95391 586 aaKnown RBP9.92□□□□□ -0.82
HPS4-209ENST00000466781 DPH6Q7L8W6 267 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 JADE2Q9NQC1 790 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 HMG20BQ9P0W2 317 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 TMEM94Q12767 1356 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 BIN1O00499 593 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 CKAP4Q07065 602 aaKnown RBP9.92□□□□□ -0.82
HPS4-209ENST00000466781 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 RAB11FIP4Q86YS3 637 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 GOLGA6L9A6NEM1 432 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 NEMFO60524 1076 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 TRIM27P14373 513 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 EYA3Q99504 573 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
HPS4-209ENST00000466781 TRPC5Q9UL62 973 aaPredicted RBP9.92□□□□□ -0.82
HPS4-209ENST00000466781 COPS6Q7L5N1 327 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 CNNM2Q9H8M5 875 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 MCM5P33992 734 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 FAM13AO94988 1023 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
HPS4-209ENST00000466781 C6orf50Q9HD87 102 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 CGNQ9P2M7 1197 aaKnown RBP9.91□□□□□ -0.82
HPS4-209ENST00000466781 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
HPS4-209ENST00000466781 PRPHP41219 470 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
HPS4-209ENST00000466781 RRAGBQ5VZM2 374 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 EYA1Q99502 592 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 PANK2Q9BZ23 570 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 HSF2BPO75031 334 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 BMP15O95972 392 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 GNAQP50148 359 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 NAPAP54920 295 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 CCDC102BQ68D86 513 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 ESR2Q92731 530 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 TCHPQ9BT92 498 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 CCDC87Q9NVE4 849 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 MAGI3Q5TCQ9 1506 aa9.91□□□□□ -0.82
HPS4-209ENST00000466781 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.82
HPS4-209ENST00000466781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.9□□□□□ -0.82
HPS4-209ENST00000466781 GJC1P36383 396 aa9.9□□□□□ -0.82
HPS4-209ENST00000466781 NAA16Q6N069 864 aaPredicted RBP9.9□□□□□ -0.82
HPS4-209ENST00000466781 TRMT1Q9NXH9 659 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms