RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
SCAF8-205ENST00000464628 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
SCAF8-205ENST00000464628 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
SCAF8-205ENST00000464628 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
SCAF8-205ENST00000464628 PDIA6Q15084 440 aa15.15■□□□□ 0.02
SCAF8-205ENST00000464628 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
SCAF8-205ENST00000464628 HTATSF1O43719 755 aaKnown RBP15.14■□□□□ 0.01
SCAF8-205ENST00000464628 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
SCAF8-205ENST00000464628 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
SCAF8-205ENST00000464628 Q7L0L9 218 aa15.14■□□□□ 0.01
SCAF8-205ENST00000464628 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
SCAF8-205ENST00000464628 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 UFL1O94874 794 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 SASH1O94885 1247 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 MTFR1Q15390 333 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 PROSER3Q2NL68 480 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 DEFB123Q8N688 67 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 SLC10A4Q96EP9 437 aa15.13■□□□□ 0.01
SCAF8-205ENST00000464628 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
SCAF8-205ENST00000464628 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
SCAF8-205ENST00000464628 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCAF8-205ENST00000464628 HTATIP2Q9BUP3 242 aa15.12■□□□□ 0.01
SCAF8-205ENST00000464628 PRDM6Q9NQX0 595 aa15.12■□□□□ 0.01
SCAF8-205ENST00000464628 USP17L3A6NCW0 530 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 USP17L4A6NCW7 530 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 ANXA1P04083 346 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 OTUD7BQ6GQQ9 843 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 USP17L1Q7RTZ2 530 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
SCAF8-205ENST00000464628 MXD3Q9BW11 206 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 MTMR10Q9NXD2 777 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 NR2E3Q9Y5X4 410 aa15.11■□□□□ 0.01
SCAF8-205ENST00000464628 MUC3AQ02505 3323 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 G3V3G9 751 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
SCAF8-205ENST00000464628 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
SCAF8-205ENST00000464628 DACT2Q5SW24 774 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
SCAF8-205ENST00000464628 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
SCAF8-205ENST00000464628 ARHGAP39Q9C0H5 1083 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
SCAF8-205ENST00000464628 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
SCAF8-205ENST00000464628 ANKRD13DQ6ZTN6 518 aa15.09■□□□□ 0.01
SCAF8-205ENST00000464628 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
SCAF8-205ENST00000464628 UNCXA6NJT0 531 aa15.08■□□□□ 0
SCAF8-205ENST00000464628 GJA8P48165 433 aa15.08■□□□□ 0
SCAF8-205ENST00000464628 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0
SCAF8-205ENST00000464628 ARHGEF6Q15052 776 aa15.08■□□□□ 0
SCAF8-205ENST00000464628 PODNQ7Z5L7 613 aa15.08■□□□□ 0
SCAF8-205ENST00000464628 PNISRQ8TF01 805 aaKnown RBP15.08■□□□□ 0
SCAF8-205ENST00000464628 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
SCAF8-205ENST00000464628 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 MGAMO43451 1857 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 EIF4G2P78344 907 aaKnown RBP eCLIP15.06■□□□□ 0
SCAF8-205ENST00000464628 TAF1CQ15572 869 aaPredicted RBP15.06■□□□□ 0
SCAF8-205ENST00000464628 COPS6Q7L5N1 327 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 NKX2-3Q8TAU0 364 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 BRI3BPQ8WY22 251 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 FAM89AQ96GI7 184 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 DEFB129Q9H1M3 183 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
SCAF8-205ENST00000464628 GJB1P08034 283 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 BMP8BP34820 402 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 OGFOD1Q8N543 542 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 GDF15Q99988 308 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 ZFYVE28Q9HCC9 887 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 SEC31BQ9NQW1 1179 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 MED23Q9ULK4 1368 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 ARAP2Q8WZ64 1704 aa15.05■□□□□ -0
SCAF8-205ENST00000464628 XDHP47989 1333 aa15.04■□□□□ -0
SCAF8-205ENST00000464628 PPP1R12BO60237 982 aaPredicted RBP15.04■□□□□ -0
SCAF8-205ENST00000464628 LACTBP83111 547 aaPredicted RBP15.04■□□□□ -0
SCAF8-205ENST00000464628 LRIT3Q3SXY7 679 aa15.04■□□□□ -0
SCAF8-205ENST00000464628 XAGE3Q8WTP9 111 aa15.04■□□□□ -0
SCAF8-205ENST00000464628 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
SCAF8-205ENST00000464628 FARP2O94887 1054 aaPredicted RBP15.03■□□□□ -0
SCAF8-205ENST00000464628 CTGFP29279 349 aa15.03■□□□□ -0
SCAF8-205ENST00000464628 PRMT2P55345 433 aa15.03■□□□□ -0
SCAF8-205ENST00000464628 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
SCAF8-205ENST00000464628 FAM43AQ8N2R8 423 aa15.03■□□□□ -0
SCAF8-205ENST00000464628 OPTNQ96CV9 577 aa15.03■□□□□ -0
SCAF8-205ENST00000464628 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
SCAF8-205ENST00000464628 ZNF804BA4D1E1 1349 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 GNRH1P01148 92 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 CCL5P13501 91 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 EIF2S2P20042 333 aaKnown RBP15.02■□□□□ -0
SCAF8-205ENST00000464628 COL9A1P20849 921 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 MMP14P50281 582 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 STRIP1Q5VSL9 837 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 ANKRD13AQ8IZ07 590 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 PPP2R3BQ9Y5P8 575 aa15.02■□□□□ -0
SCAF8-205ENST00000464628 EVI5O60447 810 aa15.01□□□□□ -0.01
SCAF8-205ENST00000464628 IREB2P48200 963 aaKnown RBP15.01□□□□□ -0.01
SCAF8-205ENST00000464628 BCAMP50895 628 aa15.01□□□□□ -0.01
SCAF8-205ENST00000464628 NBPF12Q5TAG4 269 aaPredicted RBP15.01□□□□□ -0.01
SCAF8-205ENST00000464628 ELP3Q9H9T3 547 aa15.01□□□□□ -0.01
SCAF8-205ENST00000464628 MYH3P11055 1940 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms