RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 TTC41PQ6P2S7 1318 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
TNRC6A-205ENST00000464539 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 ST3GAL1Q11201 340 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 FBXO18Q8NFZ0 1043 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 EXOC4Q96A65 974 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 POLD1P28340 1107 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 PPP1R13BQ96KQ4 1090 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
TNRC6A-205ENST00000464539 F6X3S4 739 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 MYO1CO00159 1063 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 HSPA6P17066 643 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 ARID5BQ14865 1188 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 G2E3Q7L622 706 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 SLIT3O75094 1523 aa13.43□□□□□ -0.26
TNRC6A-205ENST00000464539 EXOC5O00471 708 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 ETF1P62495 437 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 POLA2Q14181 598 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 USP16Q9Y5T5 823 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 HIP1O00291 1037 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 IVLP07476 585 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 FBLN1P23142 703 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 DHX40Q8IX18 779 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 CEP57L1Q8IYX8 460 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 COG3Q96JB2 828 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 TFIP11Q9UBB9 837 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
TNRC6A-205ENST00000464539 NHSQ6T4R5 1651 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 LRRFIP1Q32MZ4 808 aaKnown RBP13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 GPR161Q8N6U8 529 aaKnown RBP13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 NEK11Q8NG66 645 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 SMARCE1Q969G3 411 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 BPIFA3Q9BQP9 254 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 UTRNP46939 3433 aa13.41□□□□□ -0.26
TNRC6A-205ENST00000464539 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 NPHP1O15259 732 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 POLR3GO15318 223 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 TADA3O75528 432 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 CPA1P15085 419 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 PRPF40BQ6NWY9 871 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 C11orf57Q6ZUT1 292 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 OAS2P29728 719 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 NLRP6P59044 892 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 FLIIQ13045 1269 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 ICE2Q659A1 982 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 SRLQ86TD4 932 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 FCHSD1Q86WN1 690 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 RCOR1Q9UKL0 485 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
TNRC6A-205ENST00000464539 COL18A1P39060 1754 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 RPS6KA5O75582 802 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 GTF2A1P52655 376 aaPredicted RBP13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 RESTQ13127 1097 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 MCM10Q7L590 875 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
TNRC6A-205ENST00000464539 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms