RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CLMNQ96JQ2 1002 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 FZD1Q9UP38 647 aa16.5■□□□□ 0.23
SNX17-205ENST00000464279 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 OGFOD1Q8N543 542 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 MIS18AQ9NYP9 233 aa16.49■□□□□ 0.23
SNX17-205ENST00000464279 PTPN18Q99952 460 aa16.48■□□□□ 0.23
SNX17-205ENST00000464279 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
SNX17-205ENST00000464279 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
SNX17-205ENST00000464279 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
SNX17-205ENST00000464279 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
SNX17-205ENST00000464279 PSME4Q14997 1843 aa16.47■□□□□ 0.23
SNX17-205ENST00000464279 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
SNX17-205ENST00000464279 SASH1O94885 1247 aa16.47■□□□□ 0.23
SNX17-205ENST00000464279 MTFR1Q15390 333 aa16.47■□□□□ 0.23
SNX17-205ENST00000464279 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
SNX17-205ENST00000464279 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
SNX17-205ENST00000464279 TESPA1A2RU30 521 aaPredicted RBP16.46■□□□□ 0.23
SNX17-205ENST00000464279 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
SNX17-205ENST00000464279 PPP1R12BO60237 982 aaPredicted RBP16.46■□□□□ 0.23
SNX17-205ENST00000464279 EVI5O60447 810 aa16.46■□□□□ 0.23
SNX17-205ENST00000464279 GJA8P48165 433 aa16.46■□□□□ 0.23
SNX17-205ENST00000464279 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.23
SNX17-205ENST00000464279 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.23
SNX17-205ENST00000464279 COL4A1P02462 1669 aa16.46■□□□□ 0.23
SNX17-205ENST00000464279 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
SNX17-205ENST00000464279 COL9A1P20849 921 aa16.45■□□□□ 0.22
SNX17-205ENST00000464279 GJA5P36382 358 aa16.45■□□□□ 0.22
SNX17-205ENST00000464279 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
SNX17-205ENST00000464279 KIF22Q14807 665 aa16.45■□□□□ 0.22
SNX17-205ENST00000464279 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
SNX17-205ENST00000464279 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
SNX17-205ENST00000464279 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
SNX17-205ENST00000464279 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
SNX17-205ENST00000464279 GJB1P08034 283 aa16.44■□□□□ 0.22
SNX17-205ENST00000464279 PRMT2P55345 433 aa16.44■□□□□ 0.22
SNX17-205ENST00000464279 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
SNX17-205ENST00000464279 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
SNX17-205ENST00000464279 PODNQ7Z5L7 613 aa16.44■□□□□ 0.22
SNX17-205ENST00000464279 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
SNX17-205ENST00000464279 GNRH1P01148 92 aa16.43■□□□□ 0.22
SNX17-205ENST00000464279 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
SNX17-205ENST00000464279 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
SNX17-205ENST00000464279 VCANP13611 3396 aa16.43■□□□□ 0.22
SNX17-205ENST00000464279 MYO3BQ8WXR4 1341 aa16.43■□□□□ 0.22
SNX17-205ENST00000464279 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
SNX17-205ENST00000464279 BMP8BP34820 402 aa16.42■□□□□ 0.22
SNX17-205ENST00000464279 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
SNX17-205ENST00000464279 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
SNX17-205ENST00000464279 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
SNX17-205ENST00000464279 CCL5P13501 91 aa16.41■□□□□ 0.22
SNX17-205ENST00000464279 IREB2P48200 963 aaKnown RBP16.41■□□□□ 0.22
SNX17-205ENST00000464279 MMP14P50281 582 aa16.41■□□□□ 0.22
SNX17-205ENST00000464279 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
SNX17-205ENST00000464279 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
SNX17-205ENST00000464279 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
SNX17-205ENST00000464279 GDF15Q99988 308 aa16.41■□□□□ 0.22
SNX17-205ENST00000464279 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
SNX17-205ENST00000464279 DACT2Q5SW24 774 aa16.4■□□□□ 0.22
SNX17-205ENST00000464279 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
SNX17-205ENST00000464279 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
SNX17-205ENST00000464279 PPP2R3BQ9Y5P8 575 aa16.4■□□□□ 0.22
SNX17-205ENST00000464279 WDHD1O75717 1129 aaPredicted RBP16.39■□□□□ 0.21
SNX17-205ENST00000464279 PDIA6Q15084 440 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 ANKRD13AQ8IZ07 590 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
SNX17-205ENST00000464279 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 MS4A4AQ96JQ5 239 aa16.39■□□□□ 0.21
SNX17-205ENST00000464279 ANXA1P04083 346 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 GRK4P32298 578 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 BCAMP50895 628 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 SUPT20HL1Q3ZLR7 823 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
SNX17-205ENST00000464279 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 PLA2G5P39877 138 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
SNX17-205ENST00000464279 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
SNX17-205ENST00000464279 CCL15Q16663 113 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 ZBED3Q96IU2 234 aaPredicted RBP16.37■□□□□ 0.21
SNX17-205ENST00000464279 ZSWIM8A7E2V4 1837 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 XDHP47989 1333 aa16.37■□□□□ 0.21
SNX17-205ENST00000464279 TLR2O60603 784 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 GTF2A2P52657 109 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 UBXN2AP68543 259 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 TDHQ8IZJ6 230 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 RAET1EQ8TD07 263 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 ELP3Q9H9T3 547 aa16.36■□□□□ 0.21
SNX17-205ENST00000464279 BIN2Q9UBW5 565 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms