RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LILRB5O75023 590 aa5.84□□□□□ -1.47
SCFD1-204ENST00000463622 RARAP10276 462 aa5.84□□□□□ -1.47
SCFD1-204ENST00000463622 C16orf46Q6P387 395 aa5.84□□□□□ -1.47
SCFD1-204ENST00000463622 FAM35AQ86V20 835 aa5.84□□□□□ -1.47
SCFD1-204ENST00000463622 RAPGEF6Q8TEU7 1601 aa5.84□□□□□ -1.47
SCFD1-204ENST00000463622 XYLBO75191 536 aa5.84□□□□□ -1.48
SCFD1-204ENST00000463622 PLAURQ03405 335 aa5.84□□□□□ -1.48
SCFD1-204ENST00000463622 DHX32Q7L7V1 743 aaKnown RBP5.84□□□□□ -1.48
SCFD1-204ENST00000463622 SEPT3Q9UH03 358 aa5.84□□□□□ -1.48
SCFD1-204ENST00000463622 SAMD9Q5K651 1589 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 CTTNBP2Q8WZ74 1663 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 ZNF335Q9H4Z2 1342 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-204ENST00000463622 TNFRSF10BO14763 440 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 SPATA31C1P0DKV0 1188 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 PRDM6Q9NQX0 595 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 EEA1Q15075 1411 aa5.83□□□□□ -1.48
SCFD1-204ENST00000463622 CARNS1A5YM72 827 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 ZBTB39O15060 712 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 RGS9O75916 674 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 HSPA1LP34931 641 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 AFF1P51825 1210 aaKnown RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 TRIM28Q13263 835 aaKnown RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 DOC2BQ14184 412 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 PRRT3Q5FWE3 981 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 CLP1Q92989 425 aaKnown RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 KCNMB2Q9Y691 235 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 PREX1Q8TCU6 1659 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 J3QW42 95 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 PERM1Q5SV97 790 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 DMRTC2Q8IXT2 367 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-204ENST00000463622 EFCC1Q9HA90 598 aa5.82□□□□□ -1.48
SCFD1-204ENST00000463622 NPATQ14207 1427 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 MLH3Q9UHC1 1453 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 ZMYM3Q14202 1370 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 AGLP35573 1532 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 SPDYE3A6NKU9 549 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 ADAM23O75077 832 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 MAP3K6O95382 1288 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 ATP2B4P23634 1241 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 RANGAP1P46060 587 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-204ENST00000463622 TRIP4Q15650 581 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-204ENST00000463622 C14orf37Q86TY3 774 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 LPIN3Q9BQK8 851 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 CDK11AQ9UQ88 783 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-204ENST00000463622 CNTLNQ9NXG0 1405 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 CFAP74Q9C0B2 1584 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 ZNF518AQ6AHZ1 1483 aa5.81□□□□□ -1.48
SCFD1-204ENST00000463622 MMP20O60882 483 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 TRPM4Q8TD43 1214 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 NSUN5Q96P11 429 aaKnown RBP5.8□□□□□ -1.48
SCFD1-204ENST00000463622 FER1L4A9Z1Z3 1794 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 A0A0A0MRY4 1105 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 TOM1O60784 492 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 APBA3O96018 575 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 GATA4P43694 442 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 ELMSAN1Q6PJG2 1045 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 SHISA2Q6UWI4 295 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 GPR152Q8TDT2 470 aa5.8□□□□□ -1.48
SCFD1-204ENST00000463622 REREQ9P2R6 1566 aa5.79□□□□□ -1.48
SCFD1-204ENST00000463622 EIF2AK2P19525 551 aaKnown RBP5.79□□□□□ -1.48
SCFD1-204ENST00000463622 ZAP70P43403 619 aa5.79□□□□□ -1.48
SCFD1-204ENST00000463622 GRIK5Q16478 980 aa5.79□□□□□ -1.48
SCFD1-204ENST00000463622 COL26A1Q96A83 441 aa5.79□□□□□ -1.48
SCFD1-204ENST00000463622 SMG9Q9H0W8 520 aaKnown RBP5.79□□□□□ -1.48
SCFD1-204ENST00000463622 TLR7Q9NYK1 1049 aaKnown RBP5.79□□□□□ -1.48
SCFD1-204ENST00000463622 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 K7ELQ4 463 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-204ENST00000463622 PTCD1O75127 700 aaKnown RBP5.78□□□□□ -1.48
SCFD1-204ENST00000463622 EGFRP00533 1210 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 GPLD1P80108 840 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 ATCAYQ86WG3 371 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 KDM5CP41229 1560 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 PLA2R1Q13018 1463 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 TCOF1Q13428 1488 aaKnown RBP5.78□□□□□ -1.48
SCFD1-204ENST00000463622 SELPP16109 830 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 STIM2Q9P246 746 aa5.78□□□□□ -1.48
SCFD1-204ENST00000463622 CDK13Q14004 1512 aaKnown RBP5.77□□□□□ -1.49
SCFD1-204ENST00000463622 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 PSAPP07602 524 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 NRLP54845 237 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 SIK1P57059 783 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 PIP4K2BP78356 416 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 PCSK7Q16549 785 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 MSL1Q68DK7 614 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 PIK3R5Q8WYR1 880 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 C11orf16Q9NQ32 467 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 CAMSAP1Q5T5Y3 1602 aa5.77□□□□□ -1.49
SCFD1-204ENST00000463622 TROQ12816 1431 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-204ENST00000463622 TMEM88BA6NKF7 163 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 MTMR3Q13615 1198 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 GDF6Q6KF10 455 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-204ENST00000463622 NLRP13Q86W25 1043 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 PLD4Q96BZ4 506 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 RGS17Q9UGC6 210 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-204ENST00000463622 PTPRKQ15262 1439 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 DIP2CQ9Y2E4 1556 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 RAC1P63000 192 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 COL13A1Q5TAT6 717 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms