RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 DDX46Q7L014 1031 aaKnown RBP8.7□□□□□ -1.02
SREBF2-204ENST00000462539 TICAM2Q86XR7 235 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 IFNL2Q8IZJ0 200 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 PLBD2Q8NHP8 589 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 DDX11Q96FC9 970 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 FMNL2Q96PY5 1086 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 AGXT2Q9BYV1 514 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 GOLPH3LQ9H4A5 285 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 GPR108Q9NPR9 543 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 HELLSQ9NRZ9 838 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 RCOR1Q9UKL0 485 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 CFAP45Q9UL16 551 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 DOCK2Q92608 1830 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 DCCP43146 1447 aa8.7□□□□□ -1.02
SREBF2-204ENST00000462539 COL22A1Q8NFW1 1626 aaPredicted RBP8.69□□□□□ -1.02
SREBF2-204ENST00000462539 TIAM2Q8IVF5 1701 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 SMTNL1A8MU46 457 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
SREBF2-204ENST00000462539 FOSBP53539 338 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 FOXO4P98177 505 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 EXOSC10Q01780 885 aaKnown RBP8.69□□□□□ -1.02
SREBF2-204ENST00000462539 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 LRMPQ12912 555 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 SYCP1Q15431 976 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 ATL3Q6DD88 541 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 DHX32Q7L7V1 743 aaKnown RBP8.69□□□□□ -1.02
SREBF2-204ENST00000462539 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 TTC5Q8N0Z6 440 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
SREBF2-204ENST00000462539 ARID3AQ99856 593 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 LRRC2Q9BYS8 371 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 TRIM5Q9C035 493 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 NRBP1Q9UHY1 535 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 MAST3O60307 1309 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 TNS2Q63HR2 1409 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 LRP5O75197 1615 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 NHSL1Q5SYE7 1610 aa8.69□□□□□ -1.02
SREBF2-204ENST00000462539 A0A087WZG4 1122 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 H7C1W4 665 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
SREBF2-204ENST00000462539 ZC3H6P61129 1189 aaKnown RBP8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
SREBF2-204ENST00000462539 DRC7Q8IY82 874 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CACTINQ8WUQ7 758 aaKnown RBP8.68□□□□□ -1.02
SREBF2-204ENST00000462539 MRFAP1L1Q96HT8 127 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 USP28Q96RU2 1077 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 PAG1Q9NWQ8 432 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CLIP2Q9UDT6 1046 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 CARMIL3Q8ND23 1372 aa8.68□□□□□ -1.02
SREBF2-204ENST00000462539 A0A0G2JLW4 131 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 E7EWF7 191 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 M0R2C6 588 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 GOLIM4O00461 696 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 CYP27B1O15528 508 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 ITGB4P16144 1822 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 LMBR1LQ6UX01 489 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 FSIP1Q8NA03 581 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 ENGASEQ8NFI3 743 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
SREBF2-204ENST00000462539 PRDM4Q9UKN5 801 aa8.67□□□□□ -1.02
SREBF2-204ENST00000462539 CPDO75976 1380 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 ABCC12Q96J65 1359 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NBPF26B4DH59 902 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 RNF113AO15541 343 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NEMFO60524 1076 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 CIAO1O76071 339 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 IL15P40933 162 aaPredicted RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 FGD1P98174 961 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NCBP1Q09161 790 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 SNW1Q13573 536 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 ATP2B3Q16720 1220 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 UTP14CQ5TAP6 766 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NBPF10Q6P3W6 841 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 DHX40Q8IX18 779 aaKnown RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 FBXL16Q8N461 479 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 PDCL2Q8N4E4 241 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 C16orf45Q96MC5 204 aaPredicted RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 CWC25Q9NXE8 425 aaPredicted RBP8.66□□□□□ -1.02
SREBF2-204ENST00000462539 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
SREBF2-204ENST00000462539 LRP6O75581 1613 aa8.65□□□□□ -1.02
SREBF2-204ENST00000462539 ATRNO75882 1429 aa8.65□□□□□ -1.02
SREBF2-204ENST00000462539 NEDD4P46934 1319 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms