RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
CFHR3-204ENST00000461558 STIM2Q9P246 746 aa9.12□□□□□ -0.95
CFHR3-204ENST00000461558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.11□□□□□ -0.95
CFHR3-204ENST00000461558 FSCN2O14926 492 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 ZBTB39O15060 712 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 ATG7O95352 703 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 CYP2E1P05181 493 aaPredicted RBP9.11□□□□□ -0.95
CFHR3-204ENST00000461558 CDC25BP30305 580 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 NFIAQ12857 509 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 UVSSAQ2YD98 709 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 ZDHHC13Q8IUH4 622 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 ABTB2Q8N961 1025 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
CFHR3-204ENST00000461558 SPINK2P20155 84 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 EPHA1P21709 976 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 FAM117BQ6P1L5 589 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 CEP120Q8N960 986 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
CFHR3-204ENST00000461558 NCAPG2Q86XI2 1143 aa9.09□□□□□ -0.95
CFHR3-204ENST00000461558 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
CFHR3-204ENST00000461558 UTP4Q969X6 686 aaKnown RBP9.09□□□□□ -0.95
CFHR3-204ENST00000461558 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.95
CFHR3-204ENST00000461558 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
CFHR3-204ENST00000461558 PTPRAP18433 802 aa9.08□□□□□ -0.96
CFHR3-204ENST00000461558 DUOXA2Q1HG44 320 aa9.08□□□□□ -0.96
CFHR3-204ENST00000461558 FOXD4L4Q8WXT5 416 aaPredicted RBP9.08□□□□□ -0.96
CFHR3-204ENST00000461558 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
CFHR3-204ENST00000461558 SH2B1Q9NRF2 756 aaPredicted RBP9.08□□□□□ -0.96
CFHR3-204ENST00000461558 ADAM11O75078 769 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 ADAMTS4O75173 837 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
CFHR3-204ENST00000461558 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 MYRFLQ96LU7 910 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
CFHR3-204ENST00000461558 DBNDD2Q9BQY9 259 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 ADAM19Q9H013 955 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
CFHR3-204ENST00000461558 FAM177BA6PVY3 158 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 DDX3YO15523 660 aaKnown RBP9.06□□□□□ -0.96
CFHR3-204ENST00000461558 FZD5Q13467 585 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 RNF43Q68DV7 783 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 DTX1Q86Y01 620 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 TRIM42Q8IWZ5 723 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
CFHR3-204ENST00000461558 KLHDC7BQ96G42 594 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
CFHR3-204ENST00000461558 WNT11O96014 354 aa9.05□□□□□ -0.96
CFHR3-204ENST00000461558 ZNF438Q7Z4V0 828 aa9.05□□□□□ -0.96
CFHR3-204ENST00000461558 KANSL3Q9P2N6 904 aa9.05□□□□□ -0.96
CFHR3-204ENST00000461558 HMX2A2RU54 273 aa9.04□□□□□ -0.96
CFHR3-204ENST00000461558 H3BRJ5 948 aa9.04□□□□□ -0.96
CFHR3-204ENST00000461558 CNTN3Q9P232 1028 aa9.04□□□□□ -0.96
CFHR3-204ENST00000461558 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
CFHR3-204ENST00000461558 PRR19A6NJB7 356 aa9.03□□□□□ -0.96
CFHR3-204ENST00000461558 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
CFHR3-204ENST00000461558 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
CFHR3-204ENST00000461558 WNT8BQ93098 351 aa9.03□□□□□ -0.96
CFHR3-204ENST00000461558 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
CFHR3-204ENST00000461558 ATP2B4P23634 1241 aa9.02□□□□□ -0.97
CFHR3-204ENST00000461558 CABP4P57796 275 aa9.02□□□□□ -0.97
CFHR3-204ENST00000461558 FAM20CQ8IXL6 584 aa9.02□□□□□ -0.97
CFHR3-204ENST00000461558 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
CFHR3-204ENST00000461558 SALL4Q9UJQ4 1053 aa9.02□□□□□ -0.97
CFHR3-204ENST00000461558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
CFHR3-204ENST00000461558 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
CFHR3-204ENST00000461558 ACPPP15309 386 aa9.01□□□□□ -0.97
CFHR3-204ENST00000461558 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
CFHR3-204ENST00000461558 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
CFHR3-204ENST00000461558 CLEC10AQ8IUN9 316 aa9.01□□□□□ -0.97
CFHR3-204ENST00000461558 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
CFHR3-204ENST00000461558 NFKBIEO00221 500 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 SART1O43290 800 aaKnown RBP9□□□□□ -0.97
CFHR3-204ENST00000461558 CES1P23141 567 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 PREPP48147 710 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 NLRP12P59046 1061 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 XKR5Q6UX68 686 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 SHKBP1Q8TBC3 707 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 PBXIP1Q96AQ6 731 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 FAM83CQ9BQN1 747 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 RNF208Q9H0X6 261 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 DZANK1Q9NVP4 752 aa9□□□□□ -0.97
CFHR3-204ENST00000461558 BMP3P12645 472 aa8.99□□□□□ -0.97
CFHR3-204ENST00000461558 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
CFHR3-204ENST00000461558 EDEM1Q92611 657 aa8.99□□□□□ -0.97
CFHR3-204ENST00000461558 ADGRE2Q9UHX3 823 aa8.99□□□□□ -0.97
CFHR3-204ENST00000461558 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
CFHR3-204ENST00000461558 BEND4Q6ZU67 534 aa8.98□□□□□ -0.97
CFHR3-204ENST00000461558 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
CFHR3-204ENST00000461558 RUSC1Q9BVN2 902 aa8.98□□□□□ -0.97
CFHR3-204ENST00000461558 KCNF1Q9H3M0 494 aa8.98□□□□□ -0.97
CFHR3-204ENST00000461558 HIF3AQ9Y2N7 669 aa8.98□□□□□ -0.97
CFHR3-204ENST00000461558 PCSK2P16519 638 aa8.97□□□□□ -0.97
CFHR3-204ENST00000461558 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
CFHR3-204ENST00000461558 SLC7A3Q8WY07 619 aa8.97□□□□□ -0.97
CFHR3-204ENST00000461558 HHIPQ96QV1 700 aa8.97□□□□□ -0.97
CFHR3-204ENST00000461558 GGNBP2Q9H3C7 697 aa8.97□□□□□ -0.97
CFHR3-204ENST00000461558 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms