RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 NEK4P51957 841 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 NMIQ13287 307 aaPredicted RBP13.24□□□□□ -0.29
NEDD9-206ENST00000461055 KRT32Q14532 448 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
NEDD9-206ENST00000461055 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
NEDD9-206ENST00000461055 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 LAMB2P55268 1798 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
NEDD9-206ENST00000461055 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 FGFR2P21802 821 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 KCNJ4P48050 445 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 TSGA10IPQ3SY00 556 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
NEDD9-206ENST00000461055 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.29
NEDD9-206ENST00000461055 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
NEDD9-206ENST00000461055 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
NEDD9-206ENST00000461055 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 GOLIM4O00461 696 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 ZBTB22O15209 634 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
NEDD9-206ENST00000461055 MMP10P09238 476 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-206ENST00000461055 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
NEDD9-206ENST00000461055 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-206ENST00000461055 SNX14Q9Y5W7 946 aa13.22□□□□□ -0.29
NEDD9-206ENST00000461055 KIF3CO14782 793 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 IGSF3O75054 1194 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 TAF5LO75529 589 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
NEDD9-206ENST00000461055 DDIT3P35638 169 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
NEDD9-206ENST00000461055 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
NEDD9-206ENST00000461055 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
NEDD9-206ENST00000461055 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 A0A0D9SFI3 127 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 HSPA6P17066 643 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 PTMSP20962 102 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 NUCB2P80303 420 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
NEDD9-206ENST00000461055 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
NEDD9-206ENST00000461055 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 IL25Q9H293 177 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 ALDH8A1Q9H2A2 487 aaPredicted RBP13.2□□□□□ -0.3
NEDD9-206ENST00000461055 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
NEDD9-206ENST00000461055 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
NEDD9-206ENST00000461055 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
NEDD9-206ENST00000461055 ADORA1P30542 326 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEDD9-206ENST00000461055 PTH1RQ03431 593 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 ANKRD1Q15327 319 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
NEDD9-206ENST00000461055 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
NEDD9-206ENST00000461055 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
NEDD9-206ENST00000461055 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
NEDD9-206ENST00000461055 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
NEDD9-206ENST00000461055 DPEP1P16444 411 aa13.18□□□□□ -0.3
NEDD9-206ENST00000461055 CUL4AQ13619 759 aa13.18□□□□□ -0.3
NEDD9-206ENST00000461055 CCDC102BQ68D86 513 aa13.18□□□□□ -0.3
NEDD9-206ENST00000461055 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
NEDD9-206ENST00000461055 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
NEDD9-206ENST00000461055 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
NEDD9-206ENST00000461055 SLC27A2O14975 620 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
NEDD9-206ENST00000461055 CHRNDQ07001 517 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 APPBP2Q92624 585 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
NEDD9-206ENST00000461055 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
NEDD9-206ENST00000461055 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
NEDD9-206ENST00000461055 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
NEDD9-206ENST00000461055 SEMA3EO15041 775 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 NPHP1O15259 732 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 ZAP70P43403 619 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 TTC14Q96N46 770 aa13.16□□□□□ -0.3
NEDD9-206ENST00000461055 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms