RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CCDC82Q8N4S0 544 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 PUS7LQ9H0K6 701 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 GOLGA6L4A6NEF3 574 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 ME3Q16798 604 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 GPAA1O43292 621 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 CIAO1O76071 339 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 CSF1RP07333 972 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 RXRAP19793 462 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 TDO2P48775 406 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 IMMTQ16891 758 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 TNS2Q63HR2 1409 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 ZNF213O14771 459 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 LPIN2Q92539 896 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-203ENST00000460110 MAST3O60307 1309 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 CPLX1O14810 134 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 CAVIN4Q5BKX8 364 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 ARMT1Q9H993 441 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 GPHNQ9NQX3 736 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 PIH1D3Q9NQM4 214 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 KRT32Q14532 448 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 RNF214Q8ND24 703 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 NAPBQ9H115 298 aa11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 GNL3LQ9NVN8 582 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-203ENST00000460110 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 EP400Q96L91 3159 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 MBD4O95243 580 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 SYT1P21579 422 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 STX6O43752 255 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 JAK2O60674 1132 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 CYP7A1P22680 504 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 G3V3G9 751 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 FGAP02671 866 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 RPS6KB1P23443 525 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 RPGRQ92834 1020 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
NUDCD3-203ENST00000460110 MRC1P22897 1456 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 APBA3O96018 575 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ZSCAN25Q6NSZ9 544 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ANP32BQ92688 251 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ZKSCAN3Q9BRR0 538 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 GPR108Q9NPR9 543 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 NTSR2O95665 410 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 UQCRFS1P1P0C7P4 283 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 APPBP2Q92624 585 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 CTNNA3Q9UI47 895 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 CNPY2Q9Y2B0 182 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ZNF609O15014 1411 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 ANKRD1Q15327 319 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 GLIPR1L2Q4G1C9 344 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 HELLSQ9NRZ9 838 aa11.07□□□□□ -0.64
NUDCD3-203ENST00000460110 C5P01031 1676 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 PRKAB2O43741 272 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 PDE6AP16499 860 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 E7EWF7 191 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 GNL2Q13823 731 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 ZDHHC9Q9Y397 364 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 SLC4A4Q9Y6R1 1079 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 DISP2A7MBM2 1401 aa11.06□□□□□ -0.64
NUDCD3-203ENST00000460110 TTF1Q15361 905 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 SKOR2Q2VWA4 1001 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-203ENST00000460110 PIBF1Q8WXW3 757 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms