RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NSFL1CQ9UNZ2 370 aaKnown RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 ABCC12Q96J65 1359 aa7.04□□□□□ -1.28
RNU1-88P-201ENST00000459274 XDHP47989 1333 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 RIC1Q4ADV7 1423 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 CCDC88AQ3V6T2 1871 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 C6orf229H3BNL8 230 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 SEMA3EO15041 775 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 EPB41L2O43491 1005 aaKnown RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 TAF5LO75529 589 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 MAP4K4O95819 1239 aaPredicted RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 FXR2P51116 673 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 SOGA3Q5TF21 947 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 CWC27Q6UX04 472 aaKnown RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 TBC1D9Q6ZT07 1266 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 C2CD5Q86YS7 1000 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 SLF2Q8IX21 1173 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 HELBQ8NG08 1087 aaPredicted RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 HAUS7Q99871 368 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 DBNDD2Q9BQY9 259 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 C22orf23Q9BZE7 217 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZC3H12CQ9C0D7 883 aaKnown RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 PPP1R1BQ9UD71 204 aaPredicted RBP7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 MYH7P12883 1935 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 CHD4Q14839 1912 aa7.03□□□□□ -1.28
RNU1-88P-201ENST00000459274 ZNF804BA4D1E1 1349 aa7.02□□□□□ -1.28
RNU1-88P-201ENST00000459274 TUBGCP6Q96RT7 1819 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 GOLIM4O00461 696 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 PPEF1O14829 653 aaPredicted RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 ST18O60284 1047 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 IGSF3O75054 1194 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 HIBADHP31937 336 aaKnown RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 C8orf34Q49A92 452 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 STYK1Q6J9G0 422 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 SP8Q8IXZ3 490 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 AMOTL1Q8IY63 956 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 KLHL34Q8N239 644 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 CCDC24Q8N4L8 307 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 MPNDQ8N594 471 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 OTUD7AQ8TE49 926 aaPredicted RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 MTFR1LQ9H019 292 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 RNF216Q9NWF9 866 aaPredicted RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 DBNLQ9UJU6 430 aaKnown RBP7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 TAF1P21675 1872 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 CACNA1SQ13698 1873 aa7.02□□□□□ -1.29
RNU1-88P-201ENST00000459274 RAD50Q92878 1312 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 IDH1O75874 414 aaKnown RBP7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 UFL1O94874 794 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 APPP05067 770 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 LDHCP07864 332 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 CHMLP26374 656 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 PSMA5P28066 241 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 HOXA10P31260 410 aaPredicted RBP7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 GSTO1P78417 241 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 MCMDC2Q4G0Z9 681 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 TSHZ3Q63HK5 1081 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 DPP8Q6V1X1 898 aaPredicted RBP7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 KBTBD3Q8NAB2 608 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 SPATA5Q8NB90 893 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 PI4K2BQ8TCG2 481 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 CHMP4CQ96CF2 233 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 NACAP1Q9BZK3 213 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 HELLSQ9NRZ9 838 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 RAI14Q9P0K7 980 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 ABCF2Q9UG63 623 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 CTNNA3Q9UI47 895 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 ZNF609O15014 1411 aa7.01□□□□□ -1.29
RNU1-88P-201ENST00000459274 RFX7Q2KHR2 1363 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 RNF113AO15541 343 aaKnown RBP7□□□□□ -1.29
RNU1-88P-201ENST00000459274 POTEIP0CG38 1075 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 SRGNP10124 158 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
RNU1-88P-201ENST00000459274 GNAT2P19087 354 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 TGFB2P61812 414 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 FGD1P98174 961 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 CRY2Q49AN0 593 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 SLC9C2Q5TAH2 1124 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 CERS3Q8IU89 383 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 HSCBQ8IWL3 235 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 RTKN2Q8IZC4 609 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 TTLL6Q8N841 843 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 TBC1D22AQ8WUA7 517 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 AIDAQ96BJ3 306 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 ESYT1Q9BSJ8 1104 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 PIM2Q9P1W9 311 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
RNU1-88P-201ENST00000459274 ARID4AP29374 1257 aaPredicted RBP6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 DDR1Q08345 913 aa6.99□□□□□ -1.29
RNU1-88P-201ENST00000459274 TRDNQ13061 729 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms