RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 SIL1Q9H173 461 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 RCOR1Q9UKL0 485 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 RBM8AQ9Y5S9 174 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ARHGAP5Q13017 1502 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 IFT172Q9UG01 1749 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ZNF142P52746 1687 aaPredicted RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 NEURL4Q96JN8 1562 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 MAP3K13O43283 966 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ATP8B2P98198 1209 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 IL17REQ8NFR9 667 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 API5Q9BZZ5 524 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 PRR36Q9H6K5 1346 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 SURF6O75683 361 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ZNF202O95125 648 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 HDGFP51858 240 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 FKBP15Q5T1M5 1219 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 TAF3Q5VWG9 929 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ARMC3Q5W041 872 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 GGT6Q6P531 493 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 LRRCC1Q9C099 1032 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 CXorf56Q9H5V9 222 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 FANCLQ9NW38 375 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 PTPRMP28827 1452 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 PTPRUQ92729 1446 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 CCDC66A2RUB6 948 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 SYF2O95926 243 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 FNTAP49354 379 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ADKP55263 362 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 FLIIQ13045 1269 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ZNF827Q17R98 1081 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 PROSER3Q2NL68 480 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 TC2NQ8N9U0 490 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 RNF217Q8TC41 542 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 HDAC7Q8WUI4 952 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 AGLP35573 1532 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 RIMS1Q86UR5 1692 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 IKBKBO14920 756 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 CASP1P29466 404 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 SCRN1Q12765 414 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 MTHFSDQ2M296 383 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 RAB11FIP4Q86YS3 637 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 DRC7Q8IY82 874 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 EFCC1Q9HA90 598 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 KCND1Q9NSA2 647 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 TRIM10Q9UDY6 481 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 PCDHA7Q9UN72 937 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ALKQ9UM73 1620 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 TEX33O43247 280 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ATP2B1P20020 1258 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 CORO7P57737 925 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 BICC1Q9H694 974 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ABCB6Q9NP58 842 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ZC3H13Q5T200 1668 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 PDE2AO00408 941 aaPredicted RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 COBLO75128 1261 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 EPHA10Q5JZY3 1008 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 CREB3L3Q68CJ9 461 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 IQUBQ8NA54 791 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 PDE4DIPQ5VU43 2346 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 MROH7-TTC4A0A0A0MT08 1334 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ATP7BP35670 1465 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 CDC25CP30307 473 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 MCM2P49736 904 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 LIG3P49916 1009 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 FBXO31Q5XUX0 539 aaPredicted RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 LRRC4CQ9HCJ2 640 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 ARHGEF28Q8N1W1 1705 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 COL6A3P12111 3177 aa5.3□□□□□ -1.56
DEPDC1-202ENST00000456315 KRT85P78386 507 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 FMR1Q06787 632 aaKnown RBP eCLIP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 TEX35Q5T0J7 233 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 SYAP1Q96A49 352 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 SPATA32Q96LK8 384 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 DMGDHQ9UI17 866 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 EME2A4GXA9 379 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 KARSQ15046 597 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 TTC19Q6DKK2 380 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 UBXN4Q92575 508 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CDK19Q9BWU1 502 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 NBPF3Q9H094 633 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 GRIN2DO15399 1336 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 KIAA1210Q9ULL0 1709 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CELSR3Q9NYQ7 3312 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 MYO1FO00160 1098 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 ATP2B2Q01814 1243 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 DPYDQ12882 1025 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 CHAF1AQ13111 956 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 EZH2Q15910 746 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 EEF2KMTQ96G04 330 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 FAM163AQ96GL9 167 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 YY1AP1Q9H869 796 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 PUF60Q9UHX1 559 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 DLC1Q96QB1 1528 aa5.29□□□□□ -1.56
DEPDC1-202ENST00000456315 SMIM22K7EJ46 135 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms