RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
MCF2L-219ENST00000453297 CNBD1Q8NA66 436 aa29.55■■■□□ 2.32
MCF2L-219ENST00000453297 TM4SF1P30408 202 aa29.54■■■□□ 2.32
MCF2L-219ENST00000453297 MYH7P12883 1935 aa29.54■■■□□ 2.32
MCF2L-219ENST00000453297 KCNJ4P48050 445 aa29.53■■■□□ 2.32
MCF2L-219ENST00000453297 RPS8P62241 208 aaKnown RBP29.53■■■□□ 2.32
MCF2L-219ENST00000453297 LRRFIP1Q32MZ4 808 aaKnown RBP29.53■■■□□ 2.32
MCF2L-219ENST00000453297 SLFNL1Q499Z3 407 aa29.53■■■□□ 2.32
MCF2L-219ENST00000453297 CCDC129Q6ZRS4 1044 aa29.53■■■□□ 2.32
MCF2L-219ENST00000453297 IL27Q8NEV9 243 aa29.53■■■□□ 2.32
MCF2L-219ENST00000453297 ZNF827Q17R98 1081 aa29.52■■■□□ 2.32
MCF2L-219ENST00000453297 AKT1S1Q96B36 256 aa29.52■■■□□ 2.32
MCF2L-219ENST00000453297 MINPP1Q9UNW1 487 aa29.52■■■□□ 2.32
MCF2L-219ENST00000453297 CREB3L3Q68CJ9 461 aa29.52■■■□□ 2.32
MCF2L-219ENST00000453297 PRR5LQ6MZQ0 368 aa29.52■■■□□ 2.32
MCF2L-219ENST00000453297 UPF3BQ9BZI7 483 aaKnown RBP29.51■■■□□ 2.31
MCF2L-219ENST00000453297 TFCP2L1Q9NZI6 479 aa29.51■■■□□ 2.31
MCF2L-219ENST00000453297 CYP2E1P05181 493 aaPredicted RBP29.5■■■□□ 2.31
MCF2L-219ENST00000453297 ZFYP08048 801 aaPredicted RBP29.5■■■□□ 2.31
MCF2L-219ENST00000453297 RGPD3A6NKT7 1758 aaPredicted RBP29.49■■■□□ 2.31
MCF2L-219ENST00000453297 RGPD4Q7Z3J3 1758 aa29.49■■■□□ 2.31
MCF2L-219ENST00000453297 SERPINB2P05120 415 aa29.49■■■□□ 2.31
MCF2L-219ENST00000453297 HSP90AA1P07900 732 aaKnown RBP29.49■■■□□ 2.31
MCF2L-219ENST00000453297 DDIT3P35638 169 aa29.49■■■□□ 2.31
MCF2L-219ENST00000453297 MCM2P49736 904 aa29.49■■■□□ 2.31
MCF2L-219ENST00000453297 TTF1Q15361 905 aaPredicted RBP29.49■■■□□ 2.31
MCF2L-219ENST00000453297 HMG20BQ9P0W2 317 aa29.49■■■□□ 2.31
MCF2L-219ENST00000453297 SLC27A2O14975 620 aa29.48■■■□□ 2.31
MCF2L-219ENST00000453297 UBE4AQ14139 1066 aa29.48■■■□□ 2.31
MCF2L-219ENST00000453297 MYO5AQ9Y4I1 1855 aaKnown RBP29.48■■■□□ 2.31
MCF2L-219ENST00000453297 ZKSCAN1P17029 563 aaPredicted RBP29.48■■■□□ 2.31
MCF2L-219ENST00000453297 CHMP5Q9NZZ3 219 aa29.48■■■□□ 2.31
MCF2L-219ENST00000453297 MAST3O60307 1309 aa29.47■■■□□ 2.31
MCF2L-219ENST00000453297 BCAMP50895 628 aa29.47■■■□□ 2.31
MCF2L-219ENST00000453297 NBR1Q14596 966 aa29.47■■■□□ 2.31
MCF2L-219ENST00000453297 TM6SF1Q9BZW5 370 aa29.47■■■□□ 2.31
MCF2L-219ENST00000453297 RNF20Q5VTR2 975 aa29.46■■■□□ 2.31
MCF2L-219ENST00000453297 SPATA5Q8NB90 893 aa29.46■■■□□ 2.31
MCF2L-219ENST00000453297 PIH1D3Q9NQM4 214 aaKnown RBP29.46■■■□□ 2.31
MCF2L-219ENST00000453297 FOXD4L1Q9NU39 408 aa29.46■■■□□ 2.31
MCF2L-219ENST00000453297 DDR1Q08345 913 aa29.45■■■□□ 2.31
MCF2L-219ENST00000453297 ADCK5Q3MIX3 580 aa29.45■■■□□ 2.31
MCF2L-219ENST00000453297 OSBP2Q969R2 916 aa29.45■■■□□ 2.31
MCF2L-219ENST00000453297 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.45■■■□□ 2.31
MCF2L-219ENST00000453297 U3KPZ7 1027 aaPredicted RBP29.45■■■□□ 2.31
MCF2L-219ENST00000453297 M0R2C6 588 aa29.45■■■□□ 2.3
MCF2L-219ENST00000453297 ST5P78524 1137 aa29.45■■■□□ 2.3
MCF2L-219ENST00000453297 RASGRF1Q13972 1273 aa29.45■■■□□ 2.3
MCF2L-219ENST00000453297 COL23A1Q86Y22 540 aaPredicted RBP29.45■■■□□ 2.3
MCF2L-219ENST00000453297 ZSCAN25Q6NSZ9 544 aa29.44■■■□□ 2.3
MCF2L-219ENST00000453297 JAKMIP1Q96N16 626 aaKnown RBP29.44■■■□□ 2.3
MCF2L-219ENST00000453297 TTC14Q96N46 770 aa29.44■■■□□ 2.3
MCF2L-219ENST00000453297 WTIPA6NIX2 430 aaPredicted RBP29.43■■■□□ 2.3
MCF2L-219ENST00000453297 POLRMTO00411 1230 aaKnown RBP29.43■■■□□ 2.3
MCF2L-219ENST00000453297 CASTP20810 708 aaKnown RBP29.43■■■□□ 2.3
MCF2L-219ENST00000453297 WASHC4Q2M389 1173 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 APPBP2Q92624 585 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 DSCC1Q9BVC3 393 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 ANKRD2Q9GZV1 360 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 DOCK2Q92608 1830 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 TSGA10IPQ3SY00 556 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 ZSWIM6Q9HCJ5 1215 aa29.43■■■□□ 2.3
MCF2L-219ENST00000453297 ADD2P35612 726 aa29.42■■■□□ 2.3
MCF2L-219ENST00000453297 FLAD1Q8NFF5 587 aa29.42■■■□□ 2.3
MCF2L-219ENST00000453297 TMX3Q96JJ7 454 aa29.42■■■□□ 2.3
MCF2L-219ENST00000453297 GRAPQ13588 217 aa29.41■■■□□ 2.3
MCF2L-219ENST00000453297 NFKBIBQ15653 356 aa29.41■■■□□ 2.3
MCF2L-219ENST00000453297 VPS53Q5VIR6 699 aa29.41■■■□□ 2.3
MCF2L-219ENST00000453297 GRAPLQ8TC17 118 aaPredicted RBP29.41■■■□□ 2.3
MCF2L-219ENST00000453297 CIZ1Q9ULV3 898 aaPredicted RBP29.41■■■□□ 2.3
MCF2L-219ENST00000453297 ZNF804BA4D1E1 1349 aa29.41■■■□□ 2.3
MCF2L-219ENST00000453297 RPAP1Q9BWH6 1393 aaPredicted RBP29.41■■■□□ 2.3
MCF2L-219ENST00000453297 IDH1O75874 414 aaKnown RBP29.4■■■□□ 2.3
MCF2L-219ENST00000453297 HSPD1P10809 573 aaKnown RBP29.4■■■□□ 2.3
MCF2L-219ENST00000453297 CPA1P15085 419 aa29.4■■■□□ 2.3
MCF2L-219ENST00000453297 CRY2Q49AN0 593 aa29.4■■■□□ 2.3
MCF2L-219ENST00000453297 SLC9C2Q5TAH2 1124 aa29.4■■■□□ 2.3
MCF2L-219ENST00000453297 TAF6LQ9Y6J9 622 aa29.4■■■□□ 2.3
MCF2L-219ENST00000453297 GYG1P46976 350 aa29.39■■■□□ 2.3
MCF2L-219ENST00000453297 NLGN1Q8N2Q7 840 aa29.39■■■□□ 2.3
MCF2L-219ENST00000453297 PUS7LQ9H0K6 701 aaKnown RBP29.39■■■□□ 2.3
MCF2L-219ENST00000453297 CYP46A1Q9Y6A2 500 aa29.39■■■□□ 2.3
MCF2L-219ENST00000453297 PSMA5P28066 241 aa29.38■■■□□ 2.29
MCF2L-219ENST00000453297 UBE3CQ15386 1083 aa29.38■■■□□ 2.29
MCF2L-219ENST00000453297 NOL8Q76FK4 1167 aaKnown RBP29.38■■■□□ 2.29
MCF2L-219ENST00000453297 RUFY3Q7L099 469 aa29.38■■■□□ 2.29
MCF2L-219ENST00000453297 RPGRQ92834 1020 aaKnown RBP29.38■■■□□ 2.29
MCF2L-219ENST00000453297 AK2P54819 239 aa29.37■■■□□ 2.29
MCF2L-219ENST00000453297 CAVIN4Q5BKX8 364 aa29.37■■■□□ 2.29
MCF2L-219ENST00000453297 FAM84BQ96KN1 310 aaPredicted RBP29.37■■■□□ 2.29
MCF2L-219ENST00000453297 GNL3LQ9NVN8 582 aaKnown RBP29.37■■■□□ 2.29
MCF2L-219ENST00000453297 WWC3Q9ULE0 1092 aa29.37■■■□□ 2.29
MCF2L-219ENST00000453297 PDE6AP16499 860 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 CUL4AQ13619 759 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 PNPLA7Q6ZV29 1317 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 CYP21A2P08686 494 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 KRT32Q14532 448 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 PDRG1Q9NUG6 133 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 NRXN2Q9P2S2 1712 aa29.36■■■□□ 2.29
MCF2L-219ENST00000453297 ZNF532Q9HCE3 1301 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms