RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 ELNP15502 786 aa9.3□□□□□ -0.92
SCN3A-205ENST00000453007 C9orf172C9J069 976 aa9.29□□□□□ -0.92
SCN3A-205ENST00000453007 SOX18P35713 384 aa9.29□□□□□ -0.92
SCN3A-205ENST00000453007 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
SCN3A-205ENST00000453007 PLD4Q96BZ4 506 aa9.29□□□□□ -0.92
SCN3A-205ENST00000453007 FAM13AO94988 1023 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 GRIK5Q16478 980 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 ECM1Q16610 540 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
SCN3A-205ENST00000453007 ATCAYQ86WG3 371 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 FMR1NBQ8N0W7 255 aaPredicted RBP9.28□□□□□ -0.92
SCN3A-205ENST00000453007 TTC9Q92623 222 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 USP21Q9UK80 565 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
SCN3A-205ENST00000453007 MAPK1P28482 360 aa9.27□□□□□ -0.93
SCN3A-205ENST00000453007 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
SCN3A-205ENST00000453007 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
SCN3A-205ENST00000453007 SOGA1O94964 1423 aa9.27□□□□□ -0.93
SCN3A-205ENST00000453007 DNMBPQ6XZF7 1577 aa9.27□□□□□ -0.93
SCN3A-205ENST00000453007 FGD5Q6ZNL6 1462 aa9.27□□□□□ -0.93
SCN3A-205ENST00000453007 SELPP16109 830 aa9.26□□□□□ -0.93
SCN3A-205ENST00000453007 AAMPQ13685 434 aa9.26□□□□□ -0.93
SCN3A-205ENST00000453007 TTC16Q8NEE8 873 aa9.26□□□□□ -0.93
SCN3A-205ENST00000453007 OR13H1Q8NG92 308 aa9.26□□□□□ -0.93
SCN3A-205ENST00000453007 SPACA7Q96KW9 195 aa9.26□□□□□ -0.93
SCN3A-205ENST00000453007 PCSK2P16519 638 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
SCN3A-205ENST00000453007 HYAL2Q12891 473 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 ALKBH2Q6NS38 261 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 DTWD1Q8N5C7 304 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 DCTN4Q9UJW0 460 aa9.25□□□□□ -0.93
SCN3A-205ENST00000453007 HOXD8P13378 290 aaPredicted RBP9.24□□□□□ -0.93
SCN3A-205ENST00000453007 TAGLNQ01995 201 aaKnown RBP9.24□□□□□ -0.93
SCN3A-205ENST00000453007 DNM1Q05193 864 aaKnown RBP9.24□□□□□ -0.93
SCN3A-205ENST00000453007 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
SCN3A-205ENST00000453007 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
SCN3A-205ENST00000453007 EDEM1Q92611 657 aa9.24□□□□□ -0.93
SCN3A-205ENST00000453007 ABI2Q9NYB9 513 aaPredicted RBP9.24□□□□□ -0.93
SCN3A-205ENST00000453007 MPSTP25325 297 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 MBTPS1Q14703 1052 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 FBXO33Q7Z6M2 555 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 LENG1Q96BZ8 264 aaPredicted RBP9.23□□□□□ -0.93
SCN3A-205ENST00000453007 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 TPSG1Q9NRR2 321 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
SCN3A-205ENST00000453007 TARBP1Q13395 1621 aaKnown RBP9.23□□□□□ -0.93
SCN3A-205ENST00000453007 RPLP1P05386 114 aaKnown RBP9.22□□□□□ -0.93
SCN3A-205ENST00000453007 NPR3P17342 541 aa9.22□□□□□ -0.93
SCN3A-205ENST00000453007 ADGRE1Q14246 886 aa9.22□□□□□ -0.93
SCN3A-205ENST00000453007 C8orf34Q49A92 452 aa9.22□□□□□ -0.93
SCN3A-205ENST00000453007 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
SCN3A-205ENST00000453007 ELP3Q9H9T3 547 aa9.22□□□□□ -0.93
SCN3A-205ENST00000453007 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
SCN3A-205ENST00000453007 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.94
SCN3A-205ENST00000453007 COL13A1Q5TAT6 717 aaPredicted RBP9.21□□□□□ -0.94
SCN3A-205ENST00000453007 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
SCN3A-205ENST00000453007 TXNRD3Q86VQ6 643 aa9.21□□□□□ -0.94
SCN3A-205ENST00000453007 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
SCN3A-205ENST00000453007 USP35Q9P2H5 1018 aa9.21□□□□□ -0.94
SCN3A-205ENST00000453007 CYP2E1P05181 493 aaPredicted RBP9.2□□□□□ -0.94
SCN3A-205ENST00000453007 CEP135Q66GS9 1140 aa9.2□□□□□ -0.94
SCN3A-205ENST00000453007 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
SCN3A-205ENST00000453007 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
SCN3A-205ENST00000453007 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 SMNDC1O75940 238 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCN3A-205ENST00000453007 PDGFAP04085 211 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 ATP11AP98196 1134 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 LACRTQ9GZZ8 138 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 KANSL3Q9P2N6 904 aa9.19□□□□□ -0.94
SCN3A-205ENST00000453007 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
SCN3A-205ENST00000453007 EIF4G3O43432 1585 aaKnown RBP9.18□□□□□ -0.94
SCN3A-205ENST00000453007 DEAF1O75398 565 aaPredicted RBP9.18□□□□□ -0.94
SCN3A-205ENST00000453007 TCF3P15923 654 aa9.18□□□□□ -0.94
SCN3A-205ENST00000453007 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
SCN3A-205ENST00000453007 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
SCN3A-205ENST00000453007 RSPO4Q2I0M5 234 aaPredicted RBP9.18□□□□□ -0.94
SCN3A-205ENST00000453007 IGF2-ASQ6U949 168 aa9.18□□□□□ -0.94
SCN3A-205ENST00000453007 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 A6NHS1 94 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 CACTIN-AS1Q8N1I8 211 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 RASSF4Q9H2L5 321 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 GGNBP2Q9H3C7 697 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 POLIQ9UNA4 740 aa9.17□□□□□ -0.94
SCN3A-205ENST00000453007 FAM177BA6PVY3 158 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 NDUFB5O43674 189 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 KIF4AO95239 1232 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 CES1P23141 567 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 VAMP1P23763 118 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 NKAPLQ5M9Q1 402 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 TP53INP1Q96A56 240 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 MUC3BQ9H195 1237 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 CNTN3Q9P232 1028 aa9.16□□□□□ -0.94
SCN3A-205ENST00000453007 PPME1Q9Y570 386 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms