RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 CHAF1AQ13111 956 aaPredicted RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 ZSCAN25Q6NSZ9 544 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
TNXB-203ENST00000451343 HAUS7Q99871 368 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
TNXB-203ENST00000451343 ADD1P35611 737 aaKnown RBP13.52□□□□□ -0.24
TNXB-203ENST00000451343 NAA30Q147X3 362 aaPredicted RBP13.52□□□□□ -0.24
TNXB-203ENST00000451343 TTLL5Q6EMB2 1281 aa13.52□□□□□ -0.24
TNXB-203ENST00000451343 BRINP3Q76B58 766 aa13.52□□□□□ -0.24
TNXB-203ENST00000451343 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.24
TNXB-203ENST00000451343 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.24
TNXB-203ENST00000451343 USP28Q96RU2 1077 aa13.52□□□□□ -0.24
TNXB-203ENST00000451343 STRN4Q9NRL3 753 aa13.52□□□□□ -0.24
TNXB-203ENST00000451343 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
TNXB-203ENST00000451343 TPM3P06753 285 aa13.52□□□□□ -0.25
TNXB-203ENST00000451343 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
TNXB-203ENST00000451343 OTUD7BQ6GQQ9 843 aa13.52□□□□□ -0.25
TNXB-203ENST00000451343 MEGF6O75095 1541 aa13.52□□□□□ -0.25
TNXB-203ENST00000451343 MRC1P22897 1456 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 ZBTB22O15209 634 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 CYP27B1O15528 508 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
TNXB-203ENST00000451343 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 SLIT3O75094 1523 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 MST1RQ04912 1400 aa13.51□□□□□ -0.25
TNXB-203ENST00000451343 RABL6Q3YEC7 729 aaPredicted RBP13.5□□□□□ -0.25
TNXB-203ENST00000451343 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 LRRC24Q50LG9 513 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
TNXB-203ENST00000451343 PFKFB2O60825 505 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNXB-203ENST00000451343 DHX32Q7L7V1 743 aaKnown RBP13.5□□□□□ -0.25
TNXB-203ENST00000451343 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
TNXB-203ENST00000451343 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
TNXB-203ENST00000451343 USP27XA6NNY8 438 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 TNNT1P13805 278 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 CASP7P55210 303 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 HAND2P61296 217 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 IQCB1Q15051 598 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
TNXB-203ENST00000451343 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 CCDC85AQ96PX6 553 aaPredicted RBP13.49□□□□□ -0.25
TNXB-203ENST00000451343 CFAP45Q9UL16 551 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 DMTNQ08495 405 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
TNXB-203ENST00000451343 E7EWF7 191 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 ME1P48163 572 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 FOXO4P98177 505 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 TPD52L1Q16890 204 aaPredicted RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 NBPF14Q5TI25 921 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 MAST3O60307 1309 aa13.48□□□□□ -0.25
TNXB-203ENST00000451343 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
TNXB-203ENST00000451343 M0R2C6 588 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 CABP4P57796 275 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
TNXB-203ENST00000451343 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 RCOR1Q9UKL0 485 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
TNXB-203ENST00000451343 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
TNXB-203ENST00000451343 A0A1B0GVL5 298 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 PDIA3P30101 505 aaKnown RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
TNXB-203ENST00000451343 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 TRMT1Q9NXH9 659 aaKnown RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 BECN2A8MW95 431 aa13.46□□□□□ -0.25
TNXB-203ENST00000451343 KINO60870 393 aaKnown RBP13.46□□□□□ -0.25
TNXB-203ENST00000451343 A1BGP04217 495 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms