RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 SPON1Q9HCB6 807 aa15.11■□□□□ 0.01
NUP85-202ENST00000449421 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
NUP85-202ENST00000449421 PAG1Q9NWQ8 432 aa15.11■□□□□ 0.01
NUP85-202ENST00000449421 ANKRD31Q8N7Z5 1873 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 PDE8BO95263 885 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
NUP85-202ENST00000449421 UQCRFS1P1P0C7P4 283 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 PSMA5P28066 241 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 POLD1P28340 1107 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 KCNB2Q92953 911 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 XAGE2Q96GT9 111 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
NUP85-202ENST00000449421 TM6SF1Q9BZW5 370 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 HMG20BQ9P0W2 317 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 CCDC171Q6TFL3 1326 aa15.1■□□□□ 0.01
NUP85-202ENST00000449421 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
NUP85-202ENST00000449421 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 ZSCAN25Q6NSZ9 544 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 SPRYD3Q8NCJ5 442 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
NUP85-202ENST00000449421 MYH3P11055 1940 aa15.09■□□□□ 0.01
NUP85-202ENST00000449421 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
NUP85-202ENST00000449421 PTMSP20962 102 aa15.08■□□□□ 0
NUP85-202ENST00000449421 NUCB2P80303 420 aa15.08■□□□□ 0
NUP85-202ENST00000449421 KRT32Q14532 448 aa15.08■□□□□ 0
NUP85-202ENST00000449421 TTF1Q15361 905 aaPredicted RBP15.08■□□□□ 0
NUP85-202ENST00000449421 PUM3Q15397 648 aaKnown RBP15.08■□□□□ 0
NUP85-202ENST00000449421 ERFEQ4G0M1 354 aa15.08■□□□□ 0
NUP85-202ENST00000449421 LPIN2Q92539 896 aa15.08■□□□□ 0
NUP85-202ENST00000449421 SNX14Q9Y5W7 946 aa15.08■□□□□ 0
NUP85-202ENST00000449421 SPEF2Q9C093 1822 aa15.08■□□□□ 0
NUP85-202ENST00000449421 FAM177BA6PVY3 158 aa15.07■□□□□ 0
NUP85-202ENST00000449421 GOLIM4O00461 696 aa15.07■□□□□ 0
NUP85-202ENST00000449421 SLC5A1P13866 664 aa15.07■□□□□ 0
NUP85-202ENST00000449421 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
NUP85-202ENST00000449421 DDIT3P35638 169 aa15.07■□□□□ 0
NUP85-202ENST00000449421 NECTIN1Q15223 517 aa15.07■□□□□ 0
NUP85-202ENST00000449421 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
NUP85-202ENST00000449421 FAM227BQ96M60 508 aa15.07■□□□□ 0
NUP85-202ENST00000449421 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
NUP85-202ENST00000449421 LRP5O75197 1615 aa15.06■□□□□ 0
NUP85-202ENST00000449421 RNF113AO15541 343 aaKnown RBP15.06■□□□□ 0
NUP85-202ENST00000449421 CD2BP2O95400 341 aaKnown RBP15.06■□□□□ 0
NUP85-202ENST00000449421 ST5P78524 1137 aa15.06■□□□□ 0
NUP85-202ENST00000449421 INTS4Q96HW7 963 aaKnown RBP15.06■□□□□ 0
NUP85-202ENST00000449421 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 07e-7■■■■■ 32.7
NUP85-202ENST00000449421 IL25Q9H293 177 aa15.06■□□□□ 0
NUP85-202ENST00000449421 PALD1Q9ULE6 856 aa15.06■□□□□ 0
NUP85-202ENST00000449421 RBM8AQ9Y5S9 174 aaKnown RBP15.06■□□□□ 0
NUP85-202ENST00000449421 MED23Q9ULK4 1368 aa15.06■□□□□ 0
NUP85-202ENST00000449421 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
NUP85-202ENST00000449421 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
NUP85-202ENST00000449421 A0A0D9SFI3 127 aa15.05■□□□□ -0
NUP85-202ENST00000449421 PTH1RQ03431 593 aa15.05■□□□□ -0
NUP85-202ENST00000449421 TSGA10IPQ3SY00 556 aa15.05■□□□□ -0
NUP85-202ENST00000449421 PRPF40BQ6NWY9 871 aaKnown RBP15.05■□□□□ -0
NUP85-202ENST00000449421 DDX46Q7L014 1031 aaKnown RBP15.05■□□□□ -0
NUP85-202ENST00000449421 VGLL2Q8N8G2 317 aa15.05■□□□□ -0
NUP85-202ENST00000449421 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
NUP85-202ENST00000449421 NLRP3Q96P20 1036 aa15.05■□□□□ -0
NUP85-202ENST00000449421 GBP4Q96PP9 640 aa15.05■□□□□ -0
NUP85-202ENST00000449421 CYP46A1Q9Y6A2 500 aa15.05■□□□□ -0
NUP85-202ENST00000449421 KIAA1551Q9HCM1 1747 aa15.05■□□□□ -0
NUP85-202ENST00000449421 DLEC1Q9Y238 1755 aa15.04■□□□□ -0
NUP85-202ENST00000449421 TAF5LO75529 589 aa15.04■□□□□ -0
NUP85-202ENST00000449421 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
NUP85-202ENST00000449421 ANKRD1Q15327 319 aa15.04■□□□□ -0
NUP85-202ENST00000449421 CRY2Q49AN0 593 aa15.04■□□□□ -0
NUP85-202ENST00000449421 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
NUP85-202ENST00000449421 CREB3L3Q68CJ9 461 aa15.04■□□□□ -0
NUP85-202ENST00000449421 ANKRD18AQ8IVF6 992 aa15.04■□□□□ -0
NUP85-202ENST00000449421 CD2APQ9Y5K6 639 aa15.04■□□□□ -0
NUP85-202ENST00000449421 FGFR2P21802 821 aa15.03■□□□□ -0
NUP85-202ENST00000449421 PDE6BP35913 854 aa15.03■□□□□ -0
NUP85-202ENST00000449421 CUL4AQ13619 759 aa15.03■□□□□ -0
NUP85-202ENST00000449421 VPS53Q5VIR6 699 aa15.03■□□□□ -0
NUP85-202ENST00000449421 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
NUP85-202ENST00000449421 TMX3Q96JJ7 454 aa15.03■□□□□ -0
NUP85-202ENST00000449421 DSCC1Q9BVC3 393 aa15.03■□□□□ -0
NUP85-202ENST00000449421 ZSWIM6Q9HCJ5 1215 aa15.03■□□□□ -0
NUP85-202ENST00000449421 SLC27A2O14975 620 aa15.02■□□□□ -0
NUP85-202ENST00000449421 NPHP1O15259 732 aa15.02■□□□□ -0
NUP85-202ENST00000449421 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
NUP85-202ENST00000449421 ADORA1P30542 326 aa15.02■□□□□ -0
NUP85-202ENST00000449421 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
NUP85-202ENST00000449421 RUFY3Q7L099 469 aa15.02■□□□□ -0
NUP85-202ENST00000449421 CCDC24Q8N4L8 307 aa15.02■□□□□ -0
NUP85-202ENST00000449421 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02■□□□□ -0
NUP85-202ENST00000449421 PDRG1Q9NUG6 133 aa15.02■□□□□ -0
NUP85-202ENST00000449421 CTNNA3Q9UI47 895 aa15.02■□□□□ -0
NUP85-202ENST00000449421 LIMCH1Q9UPQ0 1083 aa15.02■□□□□ -0
NUP85-202ENST00000449421 COL11A2P13942 1736 aaPredicted RBP15.01□□□□□ -0.01
NUP85-202ENST00000449421 DDX11L8A8MPP1 907 aa15.01□□□□□ -0.01
NUP85-202ENST00000449421 FRAT2O75474 233 aaPredicted RBP15.01□□□□□ -0.01
NUP85-202ENST00000449421 CAPN15O75808 1086 aa15.01□□□□□ -0.01
NUP85-202ENST00000449421 HMGB1P09429 215 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms