RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SNW1Q13573 536 aaKnown RBP8.24□□□□□ -1.09
BEST1-202ENST00000449131 ZFYVE27Q5T4F4 411 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 SLC4A4Q9Y6R1 1079 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 METP08581 1390 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 KIF24Q5T7B8 1368 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 RXRAP19793 462 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 RPS6KB1P23443 525 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 ZNF445P59923 1031 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 PIAS4Q8N2W9 510 aaPredicted RBP8.24□□□□□ -1.09
BEST1-202ENST00000449131 FAM89AQ96GI7 184 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 ZNF287Q9HBT7 754 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 LUC7LQ9NQ29 371 aaKnown RBP8.24□□□□□ -1.09
BEST1-202ENST00000449131 SEC63Q9UGP8 760 aaKnown RBP8.24□□□□□ -1.09
BEST1-202ENST00000449131 MYOM2P54296 1465 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 CEP152O94986 1710 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 A0A087WWV3 80 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 U2AF2P26368 475 aaKnown RBP eCLIP8.23□□□□□ -1.09
BEST1-202ENST00000449131 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 ACSBG1Q96GR2 724 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 ZNF496Q96IT1 587 aaPredicted RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 CWC15Q9P013 229 aaKnown RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 MPHOSPH10O00566 681 aaKnown RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 KIF5CO60282 957 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 CASQ1P31415 396 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 CDR1P51861 262 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 UBASH3AP57075 661 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 LEKR1Q6ZMV7 388 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 ZNF594Q96JF6 807 aaPredicted RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 ABCC3O15438 1527 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 A0A1B0GUL7 405 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 RTN1Q16799 776 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 SIRT1Q96EB6 747 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 KRT23Q9C075 422 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 TRPM1Q7Z4N2 1603 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 EFCAB6Q5THR3 1501 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 EYA2O00167 538 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 EIF3JO75822 258 aaKnown RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 BRD1O95696 1058 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 A1BGP04217 495 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 AFMP43652 599 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 FAM193AP78312 1265 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 GCKRQ14397 625 aa8.23□□□□□ -1.09
BEST1-202ENST00000449131 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
BEST1-202ENST00000449131 IRS4O14654 1257 aaPredicted RBP8.22□□□□□ -1.09
BEST1-202ENST00000449131 PLBD2Q8NHP8 589 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 NCOA5Q9HCD5 579 aaKnown RBP8.22□□□□□ -1.09
BEST1-202ENST00000449131 ARAP3Q8WWN8 1544 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 UBA7P41226 1012 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 LRMPQ12912 555 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 ODF2Q5BJF6 829 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 OTUD7BQ6GQQ9 843 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 DZIP3Q86Y13 1208 aaKnown RBP8.22□□□□□ -1.09
BEST1-202ENST00000449131 ESR2Q92731 530 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 RIOK3O14730 519 aaKnown RBP8.22□□□□□ -1.09
BEST1-202ENST00000449131 ZNF76P36508 570 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 MIGA1Q8NAN2 632 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 STX8Q9UNK0 236 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 TET3O43151 1660 aa8.22□□□□□ -1.09
BEST1-202ENST00000449131 A0A1B0GVL5 298 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 GIGYF1O75420 1035 aaPredicted RBP8.21□□□□□ -1.09
BEST1-202ENST00000449131 ZNF853P0CG23 659 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 KIF5BP33176 963 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 ATP6V1AP38606 617 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 HSPA2P54652 639 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 GNG11P61952 73 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 PDE4BQ07343 736 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 KANK3Q6NY19 840 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 ANKRD18AQ8IVF6 992 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 TMTC2Q8N394 836 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 KAT14Q9H8E8 782 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 CNNM2Q9H8M5 875 aa8.21□□□□□ -1.09
BEST1-202ENST00000449131 NIP7Q9Y221 180 aaKnown RBP eCLIP8.21□□□□□ -1.09
BEST1-202ENST00000449131 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.09
BEST1-202ENST00000449131 GTF2F1P35269 517 aaKnown RBP eCLIP8.21□□□□□ -1.1
BEST1-202ENST00000449131 PTH1RQ03431 593 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 SYCP1Q15431 976 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 ZNF397Q8NF99 534 aaPredicted RBP8.21□□□□□ -1.1
BEST1-202ENST00000449131 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
BEST1-202ENST00000449131 HELLSQ9NRZ9 838 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 RNF216Q9NWF9 866 aaPredicted RBP8.21□□□□□ -1.1
BEST1-202ENST00000449131 PAXBP1Q9Y5B6 917 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 PPRC1Q5VV67 1664 aaKnown RBP8.21□□□□□ -1.1
BEST1-202ENST00000449131 INO80Q9ULG1 1556 aaPredicted RBP8.21□□□□□ -1.1
BEST1-202ENST00000449131 AATKQ6ZMQ8 1374 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 IDEP14735 1019 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.1
BEST1-202ENST00000449131 DDX17Q92841 729 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms