RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 CDC25BP30305 580 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
POLR1B-209ENST00000448770 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
POLR1B-209ENST00000448770 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 MAST3O60307 1309 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 NEDD4P46934 1319 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 E7EWF7 191 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 FOXP2O15409 715 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
POLR1B-209ENST00000448770 HSPD1P10809 573 aaKnown RBP16.04■□□□□ 0.16
POLR1B-209ENST00000448770 CCZ1BP86790 482 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 CCZ1P86791 482 aaPredicted RBP16.04■□□□□ 0.16
POLR1B-209ENST00000448770 FGD1P98174 961 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
POLR1B-209ENST00000448770 LLPHQ9BRT6 129 aaKnown RBP16.04■□□□□ 0.16
POLR1B-209ENST00000448770 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
POLR1B-209ENST00000448770 TJP1Q07157 1748 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 M0R2C6 588 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
POLR1B-209ENST00000448770 STX1AQ16623 288 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 ZMYM1Q5SVZ6 1142 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
POLR1B-209ENST00000448770 CARMIL3Q8ND23 1372 aa16.02■□□□□ 0.16
POLR1B-209ENST00000448770 TPD52L1Q16890 204 aaPredicted RBP16.02■□□□□ 0.16
POLR1B-209ENST00000448770 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
POLR1B-209ENST00000448770 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.16
POLR1B-209ENST00000448770 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.16
POLR1B-209ENST00000448770 NBPF11Q86T75 865 aa16.02■□□□□ 0.15
POLR1B-209ENST00000448770 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
POLR1B-209ENST00000448770 DSCC1Q9BVC3 393 aa16.02■□□□□ 0.15
POLR1B-209ENST00000448770 PCDHA7Q9UN72 937 aa16.02■□□□□ 0.15
POLR1B-209ENST00000448770 ALS2Q96Q42 1657 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
POLR1B-209ENST00000448770 GOLGA6L19H0YKK7 550 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 IGSF3O75054 1194 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 RBM6P78332 1123 aaKnown RBP16.01■□□□□ 0.15
POLR1B-209ENST00000448770 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
POLR1B-209ENST00000448770 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
POLR1B-209ENST00000448770 A0A1B0GVL5 298 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 CCDC69A6NI79 296 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 H7C1W4 665 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
POLR1B-209ENST00000448770 ME1P48163 572 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 NKX2-3Q8TAU0 364 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 OSBP2Q969R2 916 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 HELLSQ9NRZ9 838 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 COL18A1P39060 1754 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 KIF1AQ12756 1690 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 CHRNA2Q15822 529 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 HSP90AB3PQ58FF7 597 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
POLR1B-209ENST00000448770 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
POLR1B-209ENST00000448770 CLIC4Q9Y696 253 aa16■□□□□ 0.15
POLR1B-209ENST00000448770 SKILP12757 684 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 NDUFA8P51970 172 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 CEP135Q66GS9 1140 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.99■□□□□ 0.15
POLR1B-209ENST00000448770 V9GYY5 206 aaPredicted RBP15.99■□□□□ 0.15
POLR1B-209ENST00000448770 C1orf167Q5SNV9 1468 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 KINO60870 393 aaKnown RBP15.99■□□□□ 0.15
POLR1B-209ENST00000448770 HMGB1P09429 215 aaKnown RBP15.99■□□□□ 0.15
POLR1B-209ENST00000448770 HAND2P61296 217 aa15.99■□□□□ 0.15
POLR1B-209ENST00000448770 NUP188Q5SRE5 1749 aa15.98■□□□□ 0.15
POLR1B-209ENST00000448770 CTAGE5O15320 804 aa15.98■□□□□ 0.15
POLR1B-209ENST00000448770 CAVIN2O95810 425 aa15.98■□□□□ 0.15
POLR1B-209ENST00000448770 CCDC112Q8NEF3 446 aa15.98■□□□□ 0.15
POLR1B-209ENST00000448770 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
POLR1B-209ENST00000448770 KIF28PB7ZC32 967 aa15.97■□□□□ 0.15
POLR1B-209ENST00000448770 ZNF215Q9UL58 517 aaPredicted RBP15.97■□□□□ 0.15
POLR1B-209ENST00000448770 DENND2AQ9ULE3 1009 aa15.97■□□□□ 0.15
POLR1B-209ENST00000448770 A0A1B0GUL7 405 aa15.97■□□□□ 0.15
POLR1B-209ENST00000448770 BECN2A8MW95 431 aa15.97■□□□□ 0.15
POLR1B-209ENST00000448770 ADORA1P30542 326 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms