RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
CALD1-211ENST00000445569 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
CALD1-211ENST00000445569 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 RNF113AO15541 343 aaKnown RBP12.5□□□□□ -0.41
CALD1-211ENST00000445569 ADORA1P30542 326 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 RFC4P35249 363 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 PTH1RQ03431 593 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 EDC3Q96F86 508 aaKnown RBP12.5□□□□□ -0.41
CALD1-211ENST00000445569 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
CALD1-211ENST00000445569 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
CALD1-211ENST00000445569 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
CALD1-211ENST00000445569 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TAF5LO75529 589 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
CALD1-211ENST00000445569 FGFR2P21802 821 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 CUL4AQ13619 759 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
CALD1-211ENST00000445569 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
CALD1-211ENST00000445569 LRRC4BQ9NT99 713 aa12.49□□□□□ -0.41
CALD1-211ENST00000445569 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 MAST2Q6P0Q8 1798 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 MAST3O60307 1309 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 SLC27A2O14975 620 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 NPHP1O15259 732 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
CALD1-211ENST00000445569 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CALD1-211ENST00000445569 APPBP2Q92624 585 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
CALD1-211ENST00000445569 ZSCAN31Q96LW9 406 aaPredicted RBP12.48□□□□□ -0.41
CALD1-211ENST00000445569 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 SH2B1Q9NRF2 756 aaPredicted RBP12.48□□□□□ -0.41
CALD1-211ENST00000445569 MYH13Q9UKX3 1938 aa12.48□□□□□ -0.41
CALD1-211ENST00000445569 GOLGA6L22H0YM25 854 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
CALD1-211ENST00000445569 KCNQ4P56696 695 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 TTC14Q96N46 770 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
CALD1-211ENST00000445569 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
CALD1-211ENST00000445569 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 LIMCH1Q9UPQ0 1083 aa12.47□□□□□ -0.41
CALD1-211ENST00000445569 FRAT2O75474 233 aaPredicted RBP12.46□□□□□ -0.41
CALD1-211ENST00000445569 PHF14O94880 888 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 ZBTB7AO95365 584 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 MCAMP43121 646 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 ZAP70P43403 619 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 CHRNDQ07001 517 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 ZNF827Q17R98 1081 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
CALD1-211ENST00000445569 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 PDRG1Q9NUG6 133 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
CALD1-211ENST00000445569 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
CALD1-211ENST00000445569 PHKA1P46020 1223 aa12.45□□□□□ -0.42
CALD1-211ENST00000445569 AK2P54819 239 aa12.45□□□□□ -0.42
CALD1-211ENST00000445569 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
CALD1-211ENST00000445569 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
CALD1-211ENST00000445569 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
CALD1-211ENST00000445569 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
CALD1-211ENST00000445569 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.45□□□□□ -0.42
CALD1-211ENST00000445569 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
CALD1-211ENST00000445569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
CALD1-211ENST00000445569 SEMA3EO15041 775 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
CALD1-211ENST00000445569 MCM4P33991 863 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 PTGER2P43116 358 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 ST5P78524 1137 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
CALD1-211ENST00000445569 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
CALD1-211ENST00000445569 ZNF804BA4D1E1 1349 aa12.43□□□□□ -0.42
CALD1-211ENST00000445569 LRRC37AA6NMS7 1700 aa12.43□□□□□ -0.42
CALD1-211ENST00000445569 TIAM2Q8IVF5 1701 aa12.43□□□□□ -0.42
CALD1-211ENST00000445569 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
CALD1-211ENST00000445569 COL4A1P02462 1669 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms