RNA–Protein interactions for RNA: ENST00000445180.2

LINC01648-201, Transcript of long intergenic non-protein coding RNA 1648, humanhuman

TSL 1 (best) BASIC

Gene LINC01648, Length 1,519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01648-201ENST00000445180 COL4A1P02462 1669 aa17.7■□□□□ 0.42
LINC01648-201ENST00000445180 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
LINC01648-201ENST00000445180 TTF1Q15361 905 aaPredicted RBP17.69■□□□□ 0.42
LINC01648-201ENST00000445180 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
LINC01648-201ENST00000445180 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
LINC01648-201ENST00000445180 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
LINC01648-201ENST00000445180 KLRG2A4D1S0 409 aaPredicted RBP17.68■□□□□ 0.42
LINC01648-201ENST00000445180 CD2BP2O95400 341 aaKnown RBP17.68■□□□□ 0.42
LINC01648-201ENST00000445180 GRAPQ13588 217 aa17.68■□□□□ 0.42
LINC01648-201ENST00000445180 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
LINC01648-201ENST00000445180 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
LINC01648-201ENST00000445180 GRAPLQ8TC17 118 aaPredicted RBP17.68■□□□□ 0.42
LINC01648-201ENST00000445180 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
LINC01648-201ENST00000445180 PNPLA7Q6ZV29 1317 aa17.68■□□□□ 0.42
LINC01648-201ENST00000445180 ST18O60284 1047 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 CHGBP05060 677 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 CYP2E1P05181 493 aaPredicted RBP17.67■□□□□ 0.42
LINC01648-201ENST00000445180 BCAMP50895 628 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 EN1Q05925 392 aaPredicted RBP17.67■□□□□ 0.42
LINC01648-201ENST00000445180 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
LINC01648-201ENST00000445180 SNX14Q9Y5W7 946 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
LINC01648-201ENST00000445180 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 SPATA5Q8NB90 893 aa17.67■□□□□ 0.42
LINC01648-201ENST00000445180 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
LINC01648-201ENST00000445180 ARAP2Q8WZ64 1704 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 TAF1P21675 1872 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
LINC01648-201ENST00000445180 SLC15A2Q16348 729 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
LINC01648-201ENST00000445180 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
LINC01648-201ENST00000445180 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC01648-201ENST00000445180 CASZ1Q86V15 1759 aa17.66■□□□□ 0.42
LINC01648-201ENST00000445180 ZNF804BA4D1E1 1349 aa17.65■□□□□ 0.42
LINC01648-201ENST00000445180 NEK4P51957 841 aa17.65■□□□□ 0.42
LINC01648-201ENST00000445180 RASGRF1Q13972 1273 aa17.65■□□□□ 0.42
LINC01648-201ENST00000445180 PRPF40BQ6NWY9 871 aaKnown RBP17.65■□□□□ 0.42
LINC01648-201ENST00000445180 PIH1D3Q9NQM4 214 aaKnown RBP17.65■□□□□ 0.42
LINC01648-201ENST00000445180 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
LINC01648-201ENST00000445180 TNRC6CQ9HCJ0 1690 aaKnown RBP17.65■□□□□ 0.42
LINC01648-201ENST00000445180 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
LINC01648-201ENST00000445180 SOCS7O14512 581 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 KCNJ4P48050 445 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 SLFNL1Q499Z3 407 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 FBXO33Q7Z6M2 555 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 OSBP2Q969R2 916 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 FAM84BQ96KN1 310 aaPredicted RBP17.64■□□□□ 0.41
LINC01648-201ENST00000445180 CRAMP1Q96RY5 1269 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 STK32BQ9NY57 414 aa17.64■□□□□ 0.41
LINC01648-201ENST00000445180 ZBTB22O15209 634 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 BBOX1O75936 387 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
LINC01648-201ENST00000445180 MCM2P49736 904 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
LINC01648-201ENST00000445180 TSGA10IPQ3SY00 556 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 APPBP2Q92624 585 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 DSCC1Q9BVC3 393 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
LINC01648-201ENST00000445180 MAST3O60307 1309 aa17.63■□□□□ 0.41
LINC01648-201ENST00000445180 SLC27A2O14975 620 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 ADD2P35612 726 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 BAG6P46379 1132 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 GYG1P46976 350 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
LINC01648-201ENST00000445180 LEMD3Q9Y2U8 911 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 MMP10P09238 476 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
LINC01648-201ENST00000445180 M0R2C6 588 aa17.61■□□□□ 0.41
LINC01648-201ENST00000445180 SLC9C2Q5TAH2 1124 aa17.61■□□□□ 0.41
LINC01648-201ENST00000445180 EP400Q96L91 3159 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 SEMA3EO15041 775 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
LINC01648-201ENST00000445180 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
LINC01648-201ENST00000445180 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
LINC01648-201ENST00000445180 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
LINC01648-201ENST00000445180 ZSWIM6Q9HCJ5 1215 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 DENND2AQ9ULE3 1009 aa17.6■□□□□ 0.41
LINC01648-201ENST00000445180 IRS2Q9Y4H2 1338 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 PDE6AP16499 860 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 PSMA5P28066 241 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 HIBADHP31937 336 aaKnown RBP17.59■□□□□ 0.41
LINC01648-201ENST00000445180 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 C15orf52Q6ZUT6 534 aaKnown RBP17.59■□□□□ 0.41
LINC01648-201ENST00000445180 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 TTC14Q96N46 770 aa17.59■□□□□ 0.41
LINC01648-201ENST00000445180 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms