RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 LAMB2P55268 1798 aa11.86□□□□□ -0.51
LINC00642-203ENST00000444942 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
LINC00642-203ENST00000444942 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
LINC00642-203ENST00000444942 CAP1Q01518 475 aa11.85□□□□□ -0.51
LINC00642-203ENST00000444942 ANGEL2Q5VTE6 544 aaKnown RBP11.85□□□□□ -0.51
LINC00642-203ENST00000444942 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
LINC00642-203ENST00000444942 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
LINC00642-203ENST00000444942 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
LINC00642-203ENST00000444942 MUC3AQ02505 3323 aa11.85□□□□□ -0.51
LINC00642-203ENST00000444942 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 HOXB7P09629 217 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 INHBEP58166 350 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
LINC00642-203ENST00000444942 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 HTATIP2Q9BUP3 242 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 MYH16Q9H6N6 1097 aa11.84□□□□□ -0.51
LINC00642-203ENST00000444942 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
LINC00642-203ENST00000444942 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 SHISA4Q96DD7 197 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 PSME4Q14997 1843 aa11.83□□□□□ -0.52
LINC00642-203ENST00000444942 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 ABCC4O15439 1325 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
LINC00642-203ENST00000444942 SP3Q02447 781 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 SCARF1Q14162 830 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
LINC00642-203ENST00000444942 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 RAPGEFL1Q9UHV5 662 aa11.82□□□□□ -0.52
LINC00642-203ENST00000444942 MANSC4A6NHS7 340 aaPredicted RBP11.81□□□□□ -0.52
LINC00642-203ENST00000444942 IGF2BP3O00425 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00642-203ENST00000444942 MYCP01106 439 aaPredicted RBP11.81□□□□□ -0.52
LINC00642-203ENST00000444942 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
LINC00642-203ENST00000444942 FAM122AQ96E09 287 aa11.81□□□□□ -0.52
LINC00642-203ENST00000444942 EYSQ5T1H1 3165 aa11.81□□□□□ -0.52
LINC00642-203ENST00000444942 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
LINC00642-203ENST00000444942 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 VAMP4O75379 141 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 BBOX1O75936 387 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 PTPN12Q05209 780 aaKnown RBP11.8□□□□□ -0.52
LINC00642-203ENST00000444942 CRHR2Q13324 411 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 G2E3Q7L622 706 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
LINC00642-203ENST00000444942 E9PSI1 815 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 ZNF280AP59817 542 aaPredicted RBP11.79□□□□□ -0.52
LINC00642-203ENST00000444942 SLFN5Q08AF3 891 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 ARHGEF6Q15052 776 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
LINC00642-203ENST00000444942 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
LINC00642-203ENST00000444942 ZSWIM8A7E2V4 1837 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 PRUNE2Q8WUY3 3088 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 RPTORQ8N122 1335 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 ECE2O60344 883 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 NTSR2O95665 410 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 VIL1P09327 827 aaKnown RBP11.78□□□□□ -0.52
LINC00642-203ENST00000444942 BMP8BP34820 402 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 NF2P35240 595 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 LRIT3Q3SXY7 679 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 MYD88Q99836 296 aa11.78□□□□□ -0.52
LINC00642-203ENST00000444942 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
LINC00642-203ENST00000444942 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
LINC00642-203ENST00000444942 ZBTB48P10074 688 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-203ENST00000444942 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
LINC00642-203ENST00000444942 ARMC9Q7Z3E5 817 aa11.77□□□□□ -0.53
LINC00642-203ENST00000444942 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
LINC00642-203ENST00000444942 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
LINC00642-203ENST00000444942 JARID2Q92833 1246 aaPredicted RBP11.77□□□□□ -0.53
LINC00642-203ENST00000444942 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
LINC00642-203ENST00000444942 LAMA2P24043 3122 aaKnown RBP11.76□□□□□ -0.53
LINC00642-203ENST00000444942 PI4KAP2A4QPH2 592 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
LINC00642-203ENST00000444942 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 NLRP10Q86W26 655 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 PI4KAP1Q8N8J0 262 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 GDF15Q99988 308 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 UTP14AQ9BVJ6 771 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms