RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
HCFC1-203ENST00000444191 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-203ENST00000444191 PHKBQ93100 1093 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 SLU7O95391 586 aaKnown RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 A1BGP04217 495 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 DPCR1Q3MIW9 517 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 KRT222Q8N1A0 295 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 NDUFA8P51970 172 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 LRRC24Q50LG9 513 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 UTP14CQ5TAP6 766 aaKnown RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 ADCY9O60503 1353 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 SYKP43405 635 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 EVA1CP58658 441 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 GNG11P61952 73 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
HCFC1-203ENST00000444191 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
HCFC1-203ENST00000444191 E7EWF7 191 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
HCFC1-203ENST00000444191 AIFM3Q96NN9 605 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 GOLPH3LQ9H4A5 285 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 A0A1B0GUL7 405 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 KARSQ15046 597 aaKnown RBP13.49□□□□□ -0.25
HCFC1-203ENST00000444191 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
HCFC1-203ENST00000444191 TMCO3Q6UWJ1 677 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 OGFRQ9NZT2 677 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
HCFC1-203ENST00000444191 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 SPTLC3Q9NUV7 552 aa13.49□□□□□ -0.25
HCFC1-203ENST00000444191 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-203ENST00000444191 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
HCFC1-203ENST00000444191 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 RESTQ13127 1097 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 SLC26A6Q9BXS9 759 aa13.48□□□□□ -0.25
HCFC1-203ENST00000444191 STX17P56962 302 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 ADD1P35611 737 aaKnown RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 TTLL7Q6ZT98 887 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 CMTR1Q8N1G2 835 aaKnown RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 TBX22Q9Y458 520 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 ZNF202O95125 648 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 ATF3P18847 181 aa13.47□□□□□ -0.25
HCFC1-203ENST00000444191 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-203ENST00000444191 KIF20AO95235 890 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
HCFC1-203ENST00000444191 ATP1A3P13637 1013 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 ATP5JP18859 108 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■□□□ 13.7
HCFC1-203ENST00000444191 GSDMDP57764 484 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
HCFC1-203ENST00000444191 CLIC6Q96NY7 704 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 SIGLEC1Q9BZZ2 1709 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 KDRP35968 1356 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 ZNF827Q17R98 1081 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 TRMT44Q8IYL2 757 aaKnown RBP13.46□□□□□ -0.25
HCFC1-203ENST00000444191 NOL10Q9BSC4 688 aaKnown RBP13.46□□□□□ -0.25
HCFC1-203ENST00000444191 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
HCFC1-203ENST00000444191 NEMFO60524 1076 aa13.46□□□□□ -0.26
HCFC1-203ENST00000444191 AFMP43652 599 aa13.46□□□□□ -0.26
HCFC1-203ENST00000444191 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.26
HCFC1-203ENST00000444191 SLC9C2Q5TAH2 1124 aa13.46□□□□□ -0.26
HCFC1-203ENST00000444191 JMYQ8N9B5 988 aa13.46□□□□□ -0.26
HCFC1-203ENST00000444191 CARD6Q9BX69 1037 aa13.46□□□□□ -0.26
HCFC1-203ENST00000444191 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
HCFC1-203ENST00000444191 HOXB7P09629 217 aa13.45□□□□□ -0.26
HCFC1-203ENST00000444191 PNOCQ13519 176 aa13.45□□□□□ -0.26
HCFC1-203ENST00000444191 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
HCFC1-203ENST00000444191 ELP1O95163 1332 aa13.45□□□□□ -0.26
HCFC1-203ENST00000444191 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
HCFC1-203ENST00000444191 B4E1Z4 1266 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms