RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 ZBTB9Q96C00 473 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 ROBO1Q9Y6N7 1651 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 A0A1B0GVL5 298 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 PTPDC1A2A3K4 754 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 TNNT1P13805 278 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 RXRAP19793 462 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 RESTQ13127 1097 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 ZSCAN25Q6NSZ9 544 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 CLSTN2Q9H4D0 955 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 SPTLC3Q9NUV7 552 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 KCNB2Q92953 911 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 LTBP4Q8N2S1 1624 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 GOLGA6L19H0YKK7 550 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 HIP1O00291 1037 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 EPB41L2O43491 1005 aaKnown RBP15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 HMGN5P82970 282 aaKnown RBP15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 ANKRD1Q15327 319 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 MAP7D2Q96T17 732 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 DENND2AQ9ULE3 1009 aa15.43■□□□□ 0.06
SLC48A1-201ENST00000442218 BECN2A8MW95 431 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 MCMDC2Q4G0Z9 681 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 HSP90AA4PQ58FG1 418 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 DCAF5Q96JK2 942 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 BTG4Q9NY30 223 aa15.42■□□□□ 0.06
SLC48A1-201ENST00000442218 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 ZCRB1Q8TBF4 217 aaKnown RBP15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 CARD10Q9BWT7 1032 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 AOPEPQ8N6M6 819 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 PKD1L3Q7Z443 1732 aa15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
SLC48A1-201ENST00000442218 GPTP24298 496 aa15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 PRDM4Q9UKN5 801 aa15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 ATP5JP18859 108 aa15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 SDF4Q9BRK5 362 aa15.4■□□□□ 0.06
SLC48A1-201ENST00000442218 IL2RBP14784 551 aa15.39■□□□□ 0.05
SLC48A1-201ENST00000442218 AIFM3Q96NN9 605 aa15.39■□□□□ 0.05
SLC48A1-201ENST00000442218 ADORA1P30542 326 aa15.39■□□□□ 0.05
SLC48A1-201ENST00000442218 PAG1Q9NWQ8 432 aa15.39■□□□□ 0.05
SLC48A1-201ENST00000442218 SNAP23O00161 211 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 M0R2C6 588 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 PIP4K2BP78356 416 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 GOLGA8FQ08AF8 430 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 GOLGA8DPQ0D2H9 430 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 CCDC73Q6ZRK6 1079 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 E7EWF7 191 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 MARCKSP29966 332 aaPredicted RBP15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 SF3A1Q15459 793 aaKnown RBP15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 HMG20BQ9P0W2 317 aa15.38■□□□□ 0.05
SLC48A1-201ENST00000442218 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 HSPD1P10809 573 aaKnown RBP15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 ADD1P35611 737 aaKnown RBP15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 NCBP1Q09161 790 aaKnown RBP15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 PLA2G4DQ86XP0 818 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 NKX2-3Q8TAU0 364 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 CLIC4Q9Y696 253 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 ELP1O95163 1332 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 UTYO14607 1347 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 UBE2Q2LH0YL09 131 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 SKILP12757 684 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 FOXO4P98177 505 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
SLC48A1-201ENST00000442218 SMC2O95347 1197 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 SCARF1Q14162 830 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 HAUS7Q99871 368 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 C5P01031 1676 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 OSBP2Q969R2 916 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 PARP4Q9UKK3 1724 aaKnown RBP15.36■□□□□ 0.05
SLC48A1-201ENST00000442218 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 CFAP45Q9UL16 551 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 MAST3O60307 1309 aa15.35■□□□□ 0.05
SLC48A1-201ENST00000442218 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms