RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
GABRE-203ENST00000441219 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
GABRE-203ENST00000441219 OGFOD1Q8N543 542 aa11.65□□□□□ -0.54
GABRE-203ENST00000441219 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
GABRE-203ENST00000441219 LAMB4A4D0S4 1761 aa11.65□□□□□ -0.54
GABRE-203ENST00000441219 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
GABRE-203ENST00000441219 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
GABRE-203ENST00000441219 PTPN18Q99952 460 aa11.64□□□□□ -0.55
GABRE-203ENST00000441219 LRRC37AA6NMS7 1700 aa11.64□□□□□ -0.55
GABRE-203ENST00000441219 COL4A1P02462 1669 aa11.64□□□□□ -0.55
GABRE-203ENST00000441219 GJA5P36382 358 aa11.63□□□□□ -0.55
GABRE-203ENST00000441219 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
GABRE-203ENST00000441219 COL25A1Q9BXS0 654 aaPredicted RBP11.63□□□□□ -0.55
GABRE-203ENST00000441219 SEC31BQ9NQW1 1179 aa11.63□□□□□ -0.55
GABRE-203ENST00000441219 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
GABRE-203ENST00000441219 RBBP6Q7Z6E9 1792 aaKnown RBP11.63□□□□□ -0.55
GABRE-203ENST00000441219 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
GABRE-203ENST00000441219 UNC80Q8N2C7 3258 aa11.62□□□□□ -0.55
GABRE-203ENST00000441219 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
GABRE-203ENST00000441219 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
GABRE-203ENST00000441219 DEFB129Q9H1M3 183 aa11.62□□□□□ -0.55
GABRE-203ENST00000441219 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
GABRE-203ENST00000441219 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
GABRE-203ENST00000441219 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
GABRE-203ENST00000441219 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
GABRE-203ENST00000441219 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
GABRE-203ENST00000441219 MTFR1Q15390 333 aa11.61□□□□□ -0.55
GABRE-203ENST00000441219 DACT2Q5SW24 774 aa11.61□□□□□ -0.55
GABRE-203ENST00000441219 HTATIP2Q9BUP3 242 aa11.61□□□□□ -0.55
GABRE-203ENST00000441219 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
GABRE-203ENST00000441219 A0A1W2PPC1 479 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 TAF1CQ15572 869 aaPredicted RBP11.6□□□□□ -0.55
GABRE-203ENST00000441219 MAP3K11Q16584 847 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 ARHGAP39Q9C0H5 1083 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 VCANP13611 3396 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 XDHP47989 1333 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 TAF1P21675 1872 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 LAMB2P55268 1798 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
GABRE-203ENST00000441219 Q7L0L9 218 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 DEFB123Q8N688 67 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
GABRE-203ENST00000441219 ZFYVE28Q9HCC9 887 aa11.6□□□□□ -0.55
GABRE-203ENST00000441219 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 DDX60Q8IY21 1712 aaKnown RBP11.59□□□□□ -0.55
GABRE-203ENST00000441219 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
GABRE-203ENST00000441219 NEFMP07197 916 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 BRI3BPQ8WY22 251 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 STAP2Q9UGK3 403 aa11.59□□□□□ -0.55
GABRE-203ENST00000441219 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
GABRE-203ENST00000441219 STRIP1Q5VSL9 837 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 UBE2Q1Q7Z7E8 422 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 ZBED3Q96IU2 234 aaPredicted RBP11.58□□□□□ -0.56
GABRE-203ENST00000441219 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
GABRE-203ENST00000441219 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
GABRE-203ENST00000441219 CCL15-CCL14A0A0B4J2E2 113 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 KIF22Q14807 665 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 CCL15Q16663 113 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 SUPT20HL1Q3ZLR7 823 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 NBPF12Q5TAG4 269 aaPredicted RBP11.57□□□□□ -0.56
GABRE-203ENST00000441219 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
GABRE-203ENST00000441219 COL1A1P02452 1464 aaPredicted RBP11.56□□□□□ -0.56
GABRE-203ENST00000441219 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 EVI5O60447 810 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
GABRE-203ENST00000441219 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
GABRE-203ENST00000441219 GJA8P48165 433 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 LACTBP83111 547 aaPredicted RBP11.56□□□□□ -0.56
GABRE-203ENST00000441219 DLGAP5Q15398 846 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
GABRE-203ENST00000441219 ANKRD13AQ8IZ07 590 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 FAM43AQ8N2R8 423 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 CHPF2Q9P2E5 772 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
GABRE-203ENST00000441219 GJB1P08034 283 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 CCL5P13501 91 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 TTLL5Q6EMB2 1281 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 PCDHAC2Q9Y5I4 1007 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 PPP2R3BQ9Y5P8 575 aa11.55□□□□□ -0.56
GABRE-203ENST00000441219 WDHD1O75717 1129 aaPredicted RBP11.54□□□□□ -0.56
GABRE-203ENST00000441219 MMP14P50281 582 aa11.54□□□□□ -0.56
GABRE-203ENST00000441219 JARID2Q92833 1246 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms