RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
LINC00163-202ENST00000439088 TTF1Q15361 905 aaPredicted RBP17.98■□□□□ 0.47
LINC00163-202ENST00000439088 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 PHF14O94880 888 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 PHKA1P46020 1223 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 CHRNDQ07001 517 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
LINC00163-202ENST00000439088 BSDC1Q9NW68 430 aaPredicted RBP17.98■□□□□ 0.47
LINC00163-202ENST00000439088 NUCB2P80303 420 aa17.97■□□□□ 0.47
LINC00163-202ENST00000439088 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
LINC00163-202ENST00000439088 PDRG1Q9NUG6 133 aa17.97■□□□□ 0.47
LINC00163-202ENST00000439088 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
LINC00163-202ENST00000439088 AKAP11Q9UKA4 1901 aa17.97■□□□□ 0.47
LINC00163-202ENST00000439088 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
LINC00163-202ENST00000439088 AK2P54819 239 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 PI16Q6UXB8 463 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 ZGPATQ8N5A5 531 aaKnown RBP17.96■□□□□ 0.47
LINC00163-202ENST00000439088 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
LINC00163-202ENST00000439088 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
LINC00163-202ENST00000439088 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 MCM4P33991 863 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 KRT32Q14532 448 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 C4AP0C0L4 1744 aa17.96■□□□□ 0.47
LINC00163-202ENST00000439088 MAST3O60307 1309 aa17.96■□□□□ 0.46
LINC00163-202ENST00000439088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
LINC00163-202ENST00000439088 CYP2E1P05181 493 aaPredicted RBP17.95■□□□□ 0.46
LINC00163-202ENST00000439088 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
LINC00163-202ENST00000439088 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
LINC00163-202ENST00000439088 CPA1P15085 419 aa17.95■□□□□ 0.46
LINC00163-202ENST00000439088 APPBP2Q92624 585 aa17.95■□□□□ 0.46
LINC00163-202ENST00000439088 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
LINC00163-202ENST00000439088 SNAP23O00161 211 aa17.94■□□□□ 0.46
LINC00163-202ENST00000439088 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
LINC00163-202ENST00000439088 NFIXQ14938 502 aa17.94■□□□□ 0.46
LINC00163-202ENST00000439088 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
LINC00163-202ENST00000439088 M0R2C6 588 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 RPS8P62241 208 aaKnown RBP17.93■□□□□ 0.46
LINC00163-202ENST00000439088 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 BLOC1S2Q6QNY1 142 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 SPATA5Q8NB90 893 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 MINPP1Q9UNW1 487 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 CELF1Q92879 486 aaKnown RBP17.93■□□□□ 0.46
LINC00163-202ENST00000439088 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
LINC00163-202ENST00000439088 PIH1D3Q9NQM4 214 aaKnown RBP17.93■□□□□ 0.46
LINC00163-202ENST00000439088 COL4A1P02462 1669 aa17.93■□□□□ 0.46
LINC00163-202ENST00000439088 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 CYP21A2P08686 494 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 ADD2P35612 726 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 CLEC17AQ6ZS10 378 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 TAF6LQ9Y6J9 622 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 RPS6KB1P23443 525 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 UBE3CQ15386 1083 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 TXNRD1Q16881 649 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 PROM2Q8N271 834 aa17.92■□□□□ 0.46
LINC00163-202ENST00000439088 NPHP1O15259 732 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 TM4SF1P30408 202 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 BCAMP50895 628 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 RASGRF1Q13972 1273 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 SLC9C2Q5TAH2 1124 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
LINC00163-202ENST00000439088 GYS1P13807 737 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
LINC00163-202ENST00000439088 SH2B1Q9NRF2 756 aaPredicted RBP17.9■□□□□ 0.46
LINC00163-202ENST00000439088 MYH7P12883 1935 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 PLSCR1O15162 318 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
LINC00163-202ENST00000439088 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
LINC00163-202ENST00000439088 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
LINC00163-202ENST00000439088 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
LINC00163-202ENST00000439088 TAF1P21675 1872 aa17.89■□□□□ 0.45
LINC00163-202ENST00000439088 RXRBP28702 533 aa17.89■□□□□ 0.45
LINC00163-202ENST00000439088 LARP6Q9BRS8 491 aaKnown RBP17.89■□□□□ 0.45
LINC00163-202ENST00000439088 ANKRD2Q9GZV1 360 aa17.89■□□□□ 0.45
LINC00163-202ENST00000439088 GNL3LQ9NVN8 582 aaKnown RBP17.89■□□□□ 0.45
LINC00163-202ENST00000439088 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
LINC00163-202ENST00000439088 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
LINC00163-202ENST00000439088 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
LINC00163-202ENST00000439088 PDE6AP16499 860 aa17.88■□□□□ 0.45
LINC00163-202ENST00000439088 MAP3K12Q12852 859 aa17.88■□□□□ 0.45
LINC00163-202ENST00000439088 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 GPAA1O43292 621 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 PKP1Q13835 747 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 ZNF532Q9HCE3 1301 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 COL9A3Q14050 684 aaPredicted RBP17.87■□□□□ 0.45
LINC00163-202ENST00000439088 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
LINC00163-202ENST00000439088 FOXP2O15409 715 aa17.86■□□□□ 0.45
LINC00163-202ENST00000439088 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
LINC00163-202ENST00000439088 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms