RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 NCAPD2Q15021 1401 aa11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
LSMEM1-202ENST00000439068 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 SH3BP2P78314 561 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
LSMEM1-202ENST00000439068 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 TNS4Q8IZW8 715 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
LSMEM1-202ENST00000439068 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
LSMEM1-202ENST00000439068 HTRA3P83110 453 aa11.87□□□□□ -0.51
LSMEM1-202ENST00000439068 VRTNQ9H8Y1 702 aa11.87□□□□□ -0.51
LSMEM1-202ENST00000439068 MAP2P11137 1827 aaKnown RBP11.87□□□□□ -0.51
LSMEM1-202ENST00000439068 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 LMNB1P20700 586 aa11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 CHRNA5P30532 468 aa11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 PODXL2Q9NZ53 605 aa11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 KDRP35968 1356 aa11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
LSMEM1-202ENST00000439068 GLTPD2A6NH11 291 aa11.85□□□□□ -0.51
LSMEM1-202ENST00000439068 TM4SF1P30408 202 aa11.85□□□□□ -0.51
LSMEM1-202ENST00000439068 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
LSMEM1-202ENST00000439068 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
LSMEM1-202ENST00000439068 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 PRELPP51888 382 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 SKOR1P84550 965 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 DDR1Q08345 913 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 TRIM32Q13049 653 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 PLPP7Q8NBV4 271 aa11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
LSMEM1-202ENST00000439068 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.51
LSMEM1-202ENST00000439068 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 H0YIN7 160 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 ZBTB24O43167 697 aaPredicted RBP11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 ATG7O95352 703 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 NCOA4Q13772 614 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 ANKLE1Q8NAG6 615 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
LSMEM1-202ENST00000439068 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 C1QTNF2Q9BXJ5 285 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 MKRN1Q9UHC7 482 aaKnown RBP11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
LSMEM1-202ENST00000439068 SERPINB2P05120 415 aa11.81□□□□□ -0.52
LSMEM1-202ENST00000439068 NPM2Q86SE8 214 aaKnown RBP11.81□□□□□ -0.52
LSMEM1-202ENST00000439068 PANK3Q9H999 370 aa11.81□□□□□ -0.52
LSMEM1-202ENST00000439068 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
LSMEM1-202ENST00000439068 A0A087WZG4 1122 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 STARD3NLO95772 234 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 GGCXP38435 758 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 NFIXQ14938 502 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
LSMEM1-202ENST00000439068 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 RASSF7Q02833 373 aa11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 WDR90Q96KV7 1748 aa11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
LSMEM1-202ENST00000439068 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 NPHP1O15259 732 aa11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 PDE6BP35913 854 aa11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 EMID1Q96A84 441 aaPredicted RBP11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
LSMEM1-202ENST00000439068 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 RAB15P59190 212 aa11.77□□□□□ -0.53
LSMEM1-202ENST00000439068 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms