RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 ZNF408Q9H9D4 720 aa11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 PGAP2Q9UHJ9 254 aa11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
R3HDM1-208ENST00000438014 GLIS2Q9BZE0 524 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-208ENST00000438014 TMX4Q9H1E5 349 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-208ENST00000438014 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
R3HDM1-208ENST00000438014 LTBP1Q14766 1721 aa11.15□□□□□ -0.63
R3HDM1-208ENST00000438014 HMOX1P09601 288 aa11.14□□□□□ -0.63
R3HDM1-208ENST00000438014 NDUFV2P19404 249 aa11.14□□□□□ -0.63
R3HDM1-208ENST00000438014 HUNKP57058 714 aa11.14□□□□□ -0.63
R3HDM1-208ENST00000438014 CTU1Q7Z7A3 348 aaKnown RBP11.14□□□□□ -0.63
R3HDM1-208ENST00000438014 PANK3Q9H999 370 aa11.14□□□□□ -0.63
R3HDM1-208ENST00000438014 ARFGEF2Q9Y6D5 1785 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 FAM177BA6PVY3 158 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 LILRB3O75022 631 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 KDM4AO75164 1064 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 RPGRQ92834 1020 aaKnown RBP11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 ZIC5Q96T25 663 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 NYXQ9GZU5 481 aa11.13□□□□□ -0.63
R3HDM1-208ENST00000438014 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 PPIP5K2O43314 1243 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 TRPA1O75762 1119 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 QPCTQ16769 361 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 RGMBQ6NW40 437 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 ZNRF3Q9ULT6 936 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
R3HDM1-208ENST00000438014 HOXA10P31260 410 aaPredicted RBP11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 CXCL9Q07325 125 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 C2orf69Q8N8R5 385 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 MTMR14Q8NCE2 650 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
R3HDM1-208ENST00000438014 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 H7C1D1 291 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 USP46P62068 366 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 TNIP1Q15025 636 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 USP48Q86UV5 1035 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 CRAMP1Q96RY5 1269 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 SERPINA10Q9UK55 444 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 KNSTRNQ9Y448 316 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 NPC1L1Q9UHC9 1359 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
R3HDM1-208ENST00000438014 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 FAM155AB1AL88 458 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 AP1G2O75843 785 aa11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 GCGRP47871 477 aa11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 ZNF157P51786 506 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 HABP4Q5JVS0 413 aaKnown RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 PRM3Q9NNZ6 103 aa11.09□□□□□ -0.63
R3HDM1-208ENST00000438014 TCERG1O14776 1098 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 AOC3Q16853 763 aa11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 CNOT7Q9UIV1 285 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
R3HDM1-208ENST00000438014 KCNQ3O43525 872 aa11.07□□□□□ -0.64
R3HDM1-208ENST00000438014 HLFQ16534 295 aa11.07□□□□□ -0.64
R3HDM1-208ENST00000438014 CSRNP1Q96S65 589 aa11.07□□□□□ -0.64
R3HDM1-208ENST00000438014 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
R3HDM1-208ENST00000438014 COL4A5P29400 1685 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 ERVV-1B6SEH8 477 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 HOXA2O43364 376 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 SWT1Q5T5J6 900 aaKnown RBP11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 KRT26Q7Z3Y9 468 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 ATP6V0A2Q9Y487 856 aa11.06□□□□□ -0.64
R3HDM1-208ENST00000438014 RAD17O75943 681 aa11.05□□□□□ -0.64
R3HDM1-208ENST00000438014 FDX1P10109 184 aa11.05□□□□□ -0.64
R3HDM1-208ENST00000438014 PSEN2P49810 448 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms