RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 ELF2Q15723 593 aa17.46■□□□□ 0.38
TOP3B-206ENST00000436282 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.38
TOP3B-206ENST00000436282 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 V9GYY5 206 aaPredicted RBP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-206ENST00000436282 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 CEP57L1Q8IYX8 460 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-206ENST00000436282 SCRN1Q12765 414 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 COL15A1P39059 1388 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 ATL3Q6DD88 541 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 OSBPL5Q9H0X9 879 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■□□ 16
TOP3B-206ENST00000436282 NAT10Q9H0A0 1025 aaKnown RBP17.43■□□□□ 0.38
TOP3B-206ENST00000436282 IMPACTQ9P2X3 320 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 PFKFB2O60825 505 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 FAM193AP78312 1265 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 AOPEPQ8N6M6 819 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC66A2RUB6 948 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
TOP3B-206ENST00000436282 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
TOP3B-206ENST00000436282 A0A087WZG4 1122 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 USP28Q96RU2 1077 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 L2HGDHQ9H9P8 463 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 CYP21A2P08686 494 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ATP5JP18859 108 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 A0A087WWV3 80 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
TOP3B-206ENST00000436282 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF609O15014 1411 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 FGD1P98174 961 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 TFCP2Q12800 502 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC150Q8NCX0 1101 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 H2AFXP16104 143 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 PSDA5PKW4 1024 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 KCNJ6P48051 423 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 ME1P48163 572 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 FOSBP53539 338 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 ABCC6O95255 1503 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 TUBB4AP04350 444 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 BMS1Q14692 1282 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 MRPS27Q92552 414 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DNAJC2Q99543 621 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DHX32Q7L7V1 743 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 BPIFA3Q9BQP9 254 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 C5P01031 1676 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
TOP3B-206ENST00000436282 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 A1BGP04217 495 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 CHGBP05060 677 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ERCC6LQ2NKX8 1250 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ERCC4Q92889 916 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms