RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 TAF1CQ15572 869 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-212ENST00000434424 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-212ENST00000434424 CCDC74AQ96AQ1 378 aa10.58□□□□□ -0.72
PTPRK-212ENST00000434424 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-212ENST00000434424 KHNYNO15037 678 aaKnown RBP10.57□□□□□ -0.72
PTPRK-212ENST00000434424 ADH6P28332 368 aa10.57□□□□□ -0.72
PTPRK-212ENST00000434424 OSBPL7Q9BZF2 842 aa10.57□□□□□ -0.72
PTPRK-212ENST00000434424 STRN4Q9NRL3 753 aa10.57□□□□□ -0.72
PTPRK-212ENST00000434424 ZDHHC3Q9NYG2 299 aa10.57□□□□□ -0.72
PTPRK-212ENST00000434424 FAM8A1Q9UBU6 413 aa10.57□□□□□ -0.72
PTPRK-212ENST00000434424 FNDC3AQ9Y2H6 1198 aaKnown RBP10.57□□□□□ -0.72
PTPRK-212ENST00000434424 TNFRSF21O75509 655 aa10.56□□□□□ -0.72
PTPRK-212ENST00000434424 NBPF1Q3BBV0 1214 aa10.56□□□□□ -0.72
PTPRK-212ENST00000434424 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
PTPRK-212ENST00000434424 XKR5Q6UX68 686 aa10.56□□□□□ -0.72
PTPRK-212ENST00000434424 PI16Q6UXB8 463 aa10.56□□□□□ -0.72
PTPRK-212ENST00000434424 EPS8L3Q8TE67 593 aaKnown RBP10.56□□□□□ -0.72
PTPRK-212ENST00000434424 AVENQ9NQS1 362 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-212ENST00000434424 FOXD3Q9UJU5 478 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-212ENST00000434424 TLDC2A0PJX2 215 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 PIK3R2O00459 728 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 FAM157BP0CG42 384 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 ITGB7P26010 798 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 PCBP4P57723 403 aaKnown RBP10.55□□□□□ -0.72
PTPRK-212ENST00000434424 ANKRD13AQ8IZ07 590 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
PTPRK-212ENST00000434424 STK10O94804 968 aaKnown RBP10.54□□□□□ -0.72
PTPRK-212ENST00000434424 ST13P50502 369 aaKnown RBP10.54□□□□□ -0.72
PTPRK-212ENST00000434424 MEI1Q5TIA1 1274 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 IER5Q5VY09 327 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 ZNF438Q7Z4V0 828 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 Q8N3U1 123 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 TRIM11Q96F44 468 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 SUSD3Q96L08 255 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 ZFYVE28Q9HCC9 887 aa10.54□□□□□ -0.72
PTPRK-212ENST00000434424 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
PTPRK-212ENST00000434424 EFSO43281 561 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 USP17L7P0C7H9 530 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
PTPRK-212ENST00000434424 IDH3AP50213 366 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 ZNF468Q5VIY5 522 aaPredicted RBP10.53□□□□□ -0.72
PTPRK-212ENST00000434424 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 ZSWIM4Q9H7M6 989 aa10.53□□□□□ -0.72
PTPRK-212ENST00000434424 GPC6Q9Y625 555 aaPredicted RBP10.53□□□□□ -0.72
PTPRK-212ENST00000434424 PHACTR2O75167 634 aa10.52□□□□□ -0.73
PTPRK-212ENST00000434424 ARSDP51689 593 aa10.52□□□□□ -0.73
PTPRK-212ENST00000434424 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
PTPRK-212ENST00000434424 PDE12Q6L8Q7 609 aaKnown RBP10.52□□□□□ -0.73
PTPRK-212ENST00000434424 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPRK-212ENST00000434424 ANKIB1Q9P2G1 1089 aa10.52□□□□□ -0.73
PTPRK-212ENST00000434424 GJA8P48165 433 aa10.51□□□□□ -0.73
PTPRK-212ENST00000434424 PAK2Q13177 524 aa10.51□□□□□ -0.73
PTPRK-212ENST00000434424 CMTR1Q8N1G2 835 aaKnown RBP10.51□□□□□ -0.73
PTPRK-212ENST00000434424 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
PTPRK-212ENST00000434424 MDFIQ99750 246 aa10.51□□□□□ -0.73
PTPRK-212ENST00000434424 OSBPL2Q9H1P3 480 aa10.51□□□□□ -0.73
PTPRK-212ENST00000434424 DMGDHQ9UI17 866 aaKnown RBP10.51□□□□□ -0.73
PTPRK-212ENST00000434424 UBAP1LF5GYI3 381 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 FGRP09769 529 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 PIF1Q9H611 641 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 MARK1Q9P0L2 795 aa10.5□□□□□ -0.73
PTPRK-212ENST00000434424 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 GADD45BO75293 160 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-212ENST00000434424 ATF4P18848 351 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-212ENST00000434424 NXPE4Q6UWF7 544 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 ERMP1Q7Z2K6 904 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 ELP3Q9H9T3 547 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 NEUROD4Q9HD90 331 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 NPHS2Q9NP85 383 aa10.49□□□□□ -0.73
PTPRK-212ENST00000434424 RTCBQ9Y3I0 505 aaKnown RBP10.49□□□□□ -0.73
PTPRK-212ENST00000434424 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 HSH2DQ96JZ2 352 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 BCO2Q9BYV7 579 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 PRR12Q9ULL5 1215 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 GJA3Q9Y6H8 435 aa10.48□□□□□ -0.73
PTPRK-212ENST00000434424 INPP5BP32019 993 aa10.47□□□□□ -0.73
PTPRK-212ENST00000434424 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
PTPRK-212ENST00000434424 DOC2BQ14184 412 aa10.47□□□□□ -0.73
PTPRK-212ENST00000434424 TRIP4Q15650 581 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-212ENST00000434424 ZNF662Q6ZS27 426 aa10.47□□□□□ -0.73
PTPRK-212ENST00000434424 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-212ENST00000434424 BTLAQ7Z6A9 289 aa10.46□□□□□ -0.73
PTPRK-212ENST00000434424 GALNT12Q8IXK2 581 aa10.46□□□□□ -0.73
PTPRK-212ENST00000434424 COPRSQ9NQ92 184 aa10.46□□□□□ -0.73
PTPRK-212ENST00000434424 TMEM63CQ9P1W3 806 aa10.46□□□□□ -0.73
PTPRK-212ENST00000434424 TBX22Q9Y458 520 aa10.46□□□□□ -0.73
PTPRK-212ENST00000434424 ELOA3CA0A087WX78 387 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-212ENST00000434424 ELOA3DA6NLF2 546 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-212ENST00000434424 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
PTPRK-212ENST00000434424 LRRC69Q6ZNQ3 347 aa10.45□□□□□ -0.74
PTPRK-212ENST00000434424 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
PTPRK-212ENST00000434424 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
PTPRK-212ENST00000434424 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
PTPRK-212ENST00000434424 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms