RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
COL6A3-207ENST00000433762 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
COL6A3-207ENST00000433762 FAM173BQ6P4H8 233 aa16.06■□□□□ 0.16
COL6A3-207ENST00000433762 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
COL6A3-207ENST00000433762 GOLIM4O00461 696 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 IFIT1P09914 478 aaKnown RBP16.05■□□□□ 0.16
COL6A3-207ENST00000433762 KCNF1Q9H3M0 494 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
COL6A3-207ENST00000433762 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
COL6A3-207ENST00000433762 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 MAST3O60307 1309 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 E7EWF7 191 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 NR1I2O75469 434 aa16.05■□□□□ 0.16
COL6A3-207ENST00000433762 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 ZNF75DP51815 510 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 ZNF165P49910 485 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 NEUROD6Q96NK8 337 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 CEP126Q9P2H0 1117 aa16.04■□□□□ 0.16
COL6A3-207ENST00000433762 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 NEMFO60524 1076 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 CHAF1AQ13111 956 aaPredicted RBP16.03■□□□□ 0.16
COL6A3-207ENST00000433762 CAMK4Q16566 473 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 STX1AQ16623 288 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
COL6A3-207ENST00000433762 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
COL6A3-207ENST00000433762 TEX13AQ9BXU3 409 aaPredicted RBP16.03■□□□□ 0.16
COL6A3-207ENST00000433762 MYH3P11055 1940 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
COL6A3-207ENST00000433762 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.16
COL6A3-207ENST00000433762 CHRNA2Q15822 529 aa16.02■□□□□ 0.16
COL6A3-207ENST00000433762 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
COL6A3-207ENST00000433762 LUZP1Q86V48 1076 aa16.02■□□□□ 0.16
COL6A3-207ENST00000433762 CHMP3Q9Y3E7 222 aa16.02■□□□□ 0.16
COL6A3-207ENST00000433762 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.15
COL6A3-207ENST00000433762 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.15
COL6A3-207ENST00000433762 CCDC73Q6ZRK6 1079 aa16.02■□□□□ 0.15
COL6A3-207ENST00000433762 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.15
COL6A3-207ENST00000433762 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.15
COL6A3-207ENST00000433762 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
COL6A3-207ENST00000433762 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.15
COL6A3-207ENST00000433762 ATRNO75882 1429 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 PLCB2Q00722 1185 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 ZNF512BQ96KM6 892 aaPredicted RBP16.01■□□□□ 0.15
COL6A3-207ENST00000433762 CARMIL3Q8ND23 1372 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
COL6A3-207ENST00000433762 FAM13BQ9NYF5 915 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
COL6A3-207ENST00000433762 TIMM10P62072 90 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 APOBRQ0VD83 1088 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 IQCB1Q15051 598 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 ENGASEQ8NFI3 743 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 RTEL1Q9NZ71 1219 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 C4AP0C0L4 1744 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 C4BP0C0L5 1744 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 CSF1RP07333 972 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 IL2RBP14784 551 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 IMMTQ16891 758 aaKnown RBP16■□□□□ 0.15
COL6A3-207ENST00000433762 LRRC24Q50LG9 513 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 APPBP2Q92624 585 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 DDX11Q96FC9 970 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 ANO10Q9NW15 660 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 PYCARDQ9ULZ3 195 aa16■□□□□ 0.15
COL6A3-207ENST00000433762 ARAP2Q8WZ64 1704 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 DHX8Q14562 1220 aaKnown RBP15.99■□□□□ 0.15
COL6A3-207ENST00000433762 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 BRAPQ7Z569 592 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 CCAR1Q8IX12 1150 aaKnown RBP15.99■□□□□ 0.15
COL6A3-207ENST00000433762 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 LRP6O75581 1613 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 KINO60870 393 aaKnown RBP15.99■□□□□ 0.15
COL6A3-207ENST00000433762 YEATS4O95619 227 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 SNW1Q13573 536 aaKnown RBP15.99■□□□□ 0.15
COL6A3-207ENST00000433762 SYCP1Q15431 976 aa15.99■□□□□ 0.15
COL6A3-207ENST00000433762 SOS2Q07890 1332 aaPredicted RBP15.98■□□□□ 0.15
COL6A3-207ENST00000433762 GOLGA6L19H0YKK7 550 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 ADALQ6DHV7 355 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 ZSCAN25Q6NSZ9 544 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 USP28Q96RU2 1077 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 DNAJC25Q9H1X3 360 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 M0R2C6 588 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 DTNBO60941 627 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 A1BGP04217 495 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 CHGBP05060 677 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 PTGS1P23219 599 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 TTC39AQ5SRH9 613 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 KCNG4Q8TDN1 519 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 OSBP2Q969R2 916 aa15.98■□□□□ 0.15
COL6A3-207ENST00000433762 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms