RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
SMPD4-205ENST00000431183 CAVIN4Q5BKX8 364 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 KIF2CQ99661 725 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 RXRAP19793 462 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 ST5P78524 1137 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 PUS7LQ9H0K6 701 aaKnown RBP13.49□□□□□ -0.25
SMPD4-205ENST00000431183 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 PIH1D3Q9NQM4 214 aaKnown RBP13.49□□□□□ -0.25
SMPD4-205ENST00000431183 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 GYS1P13807 737 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 CHRNA5P30532 468 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
SMPD4-205ENST00000431183 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
SMPD4-205ENST00000431183 UFL1O94874 794 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 OSBP2Q969R2 916 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-205ENST00000431183 RAD21O60216 631 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 CSF1RP07333 972 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-205ENST00000431183 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
SMPD4-205ENST00000431183 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 NYXQ9GZU5 481 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 MINPP1Q9UNW1 487 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 M0R2C6 588 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 PRKAB2O43741 272 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 PRDM1O75626 825 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 SSFA2P28290 1259 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 CCDC171Q6TFL3 1326 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-205ENST00000431183 CYP7A1P22680 504 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 SDR42E1Q8WUS8 393 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 LPIN2Q92539 896 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 HAUS7Q99871 368 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 GDPD2Q9HCC8 539 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-205ENST00000431183 HMG20BQ9P0W2 317 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 RGS17Q9UGC6 210 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-205ENST00000431183 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
SMPD4-205ENST00000431183 TDO2P48775 406 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.25
SMPD4-205ENST00000431183 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 SPATA5Q8NB90 893 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-205ENST00000431183 CYP46A1Q9Y6A2 500 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
SMPD4-205ENST00000431183 MBD4O95243 580 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
SMPD4-205ENST00000431183 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.25
SMPD4-205ENST00000431183 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.26
SMPD4-205ENST00000431183 AK2P54819 239 aa13.46□□□□□ -0.26
SMPD4-205ENST00000431183 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
SMPD4-205ENST00000431183 DDR1Q08345 913 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 GPAA1O43292 621 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■■□□ 17.9
SMPD4-205ENST00000431183 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMPD4-205ENST00000431183 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 TOGARAM1Q9Y4F4 1720 aa13.45□□□□□ -0.26
SMPD4-205ENST00000431183 SMIM22K7EJ46 135 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 BRF1Q92994 677 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 SLC27A2O14975 620 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-205ENST00000431183 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
SMPD4-205ENST00000431183 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
SMPD4-205ENST00000431183 AATFQ9NY61 560 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMPD4-205ENST00000431183 DYNLL1P63167 89 aaKnown RBP13.44□□□□□ -0.26
SMPD4-205ENST00000431183 CEBPZQ03701 1054 aaKnown RBP13.44□□□□□ -0.26
SMPD4-205ENST00000431183 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
SMPD4-205ENST00000431183 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
SMPD4-205ENST00000431183 MAST3O60307 1309 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 RAD50Q92878 1312 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 HIP1O00291 1037 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 PRDX5P30044 214 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
SMPD4-205ENST00000431183 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
SMPD4-205ENST00000431183 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
SMPD4-205ENST00000431183 LARGE1O95461 756 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms