RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 COL4A5P29400 1685 aa10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 ZNF157P51786 506 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 HSP90AB3PQ58FF7 597 aa10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 Q6ZNB5 142 aa10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 KRT26Q7Z3Y9 468 aa10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 GBA2Q9HCG7 927 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 SAGE1Q9NXZ1 904 aa10.31□□□□□ -0.76
ECHDC1-207ENST00000430841 BBOX1O75936 387 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 SUSD4Q5VX71 490 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 RGMBQ6NW40 437 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 TTLL7Q6ZT98 887 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 USP48Q86UV5 1035 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 CNOT7Q9UIV1 285 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 HDAC9Q9UKV0 1011 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 AKAP11Q9UKA4 1901 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 SNED1Q8TER0 1413 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 ABCC4O15439 1325 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 UBN2Q6ZU65 1347 aa10.3□□□□□ -0.76
ECHDC1-207ENST00000430841 NTSR2O95665 410 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 KIAA2012Q0VF49 1180 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 TMEM132AQ24JP5 1023 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 EYA3Q99504 573 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 GTF3C3Q9Y5Q9 886 aa10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-207ENST00000430841 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 TBC1D12O60347 775 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 TRPA1O75762 1119 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 TBC1D10BQ4KMP7 808 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 CTU1Q7Z7A3 348 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 TRMT112Q9UI30 125 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
ECHDC1-207ENST00000430841 PER1O15534 1290 aaPredicted RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 EIF2S2P20042 333 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 RPS12P25398 132 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 KIF23Q02241 960 aaPredicted RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 GRAPQ13588 217 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 WASHC4Q2M389 1173 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 ZNF34Q8IZ26 560 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 GRAPLQ8TC17 118 aaPredicted RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 GCC1Q96CN9 775 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 RTFDC1Q9BY42 306 aaPredicted RBP10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 SH3TC1Q8TE82 1336 aa10.27□□□□□ -0.77
ECHDC1-207ENST00000430841 ANKRD36CQ5JPF3 1778 aa10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 KIF4BQ2VIQ3 1234 aa10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 DPF2Q92785 391 aa10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 PGAP2Q9UHJ9 254 aa10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 NSFL1CQ9UNZ2 370 aaKnown RBP10.26□□□□□ -0.77
ECHDC1-207ENST00000430841 TNRC18O15417 2968 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 HCLS1P14317 486 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 PKN2Q16513 984 aaKnown RBP10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 DBNDD1Q9H9R9 158 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 GGA3Q9NZ52 723 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
ECHDC1-207ENST00000430841 LAMB2P55268 1798 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 TULP1O00294 542 aaPredicted RBP10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 PSMD14O00487 310 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 ECE2O60344 883 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 HSP90B1P14625 803 aaKnown RBP10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 PTPREP23469 700 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 NF2P35240 595 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 LMOD3Q0VAK6 560 aa10.24□□□□□ -0.77
ECHDC1-207ENST00000430841 SLC10A3P09131 477 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 HIRAP54198 1017 aaPredicted RBP10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 SLC10A5Q5PT55 438 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 WDR70Q9NW82 654 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
ECHDC1-207ENST00000430841 FKBP1BP68106 108 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 NLRP10Q86W26 655 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 CDCA5Q96FF9 252 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 ZIC5Q96T25 663 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 HPS5Q9UPZ3 1129 aa10.22□□□□□ -0.77
ECHDC1-207ENST00000430841 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 PAPPA2Q9BXP8 1791 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms