RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 C9orf78Q9NZ63 289 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 F13A1P00488 732 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 TPM3P06753 285 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
GABPB1-205ENST00000429662 PDCP20941 246 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 AK2P54819 239 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
GABPB1-205ENST00000429662 TICAM2Q86XR7 235 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 LINS1Q8NG48 757 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 HS3ST6Q96QI5 342 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 CYP46A1Q9Y6A2 500 aa10.38□□□□□ -0.75
GABPB1-205ENST00000429662 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
GABPB1-205ENST00000429662 KCNA3P22001 575 aa10.37□□□□□ -0.75
GABPB1-205ENST00000429662 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 FOXD4L5Q5VV16 416 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 DDX54Q8TDD1 881 aaKnown RBP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 FOXD4L4Q8WXT5 416 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
GABPB1-205ENST00000429662 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
GABPB1-205ENST00000429662 COL5A3P25940 1745 aaPredicted RBP10.36□□□□□ -0.75
GABPB1-205ENST00000429662 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
GABPB1-205ENST00000429662 CASTP20810 708 aaKnown RBP10.36□□□□□ -0.75
GABPB1-205ENST00000429662 SYT1P21579 422 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 CWC27Q6UX04 472 aaKnown RBP10.36□□□□□ -0.75
GABPB1-205ENST00000429662 RUFY3Q7L099 469 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 KRTAP3-3Q9BYR6 98 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 KRTAP3-2Q9BYR7 98 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 PDCL3Q9H2J4 239 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 DDX21Q9NR30 783 aaKnown RBP eCLIP10.36□□□□□ -0.75
GABPB1-205ENST00000429662 HMG20BQ9P0W2 317 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 MAP3K2Q9Y2U5 619 aa10.36□□□□□ -0.75
GABPB1-205ENST00000429662 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 PALLDQ8WX93 1383 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 CCDC171Q6TFL3 1326 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 G3V3G9 751 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 GRM8O00222 908 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 KIAA2012Q0VF49 1180 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 NOL8Q76FK4 1167 aaKnown RBP10.35□□□□□ -0.75
GABPB1-205ENST00000429662 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
GABPB1-205ENST00000429662 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-205ENST00000429662 RFX7Q2KHR2 1363 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 FOXN1O15353 648 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-205ENST00000429662 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-205ENST00000429662 NEXNQ0ZGT2 675 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 KRT32Q14532 448 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 FLAD1Q8NFF5 587 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 MAP4K1Q92918 833 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 JAKMIP1Q96N16 626 aaKnown RBP10.34□□□□□ -0.75
GABPB1-205ENST00000429662 IL25Q9H293 177 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 DLEC1Q9Y238 1755 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 AK9Q5TCS8 1911 aa10.34□□□□□ -0.75
GABPB1-205ENST00000429662 ELP1O95163 1332 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
GABPB1-205ENST00000429662 DYNC1I1O14576 645 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 GADD45BO75293 160 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-205ENST00000429662 GJB2P29033 226 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
GABPB1-205ENST00000429662 SASS6Q6UVJ0 657 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 AACSQ86V21 672 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 PDE4DIPQ5VU43 2346 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 COL15A1P39059 1388 aa10.33□□□□□ -0.76
GABPB1-205ENST00000429662 MYH14Q7Z406 1995 aaKnown RBP10.33□□□□□ -0.76
GABPB1-205ENST00000429662 A0A0G2JLW4 131 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 KCNQ3O43525 872 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 KCNJ4P48050 445 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 KRT85P78386 507 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
GABPB1-205ENST00000429662 MPRIPQ6WCQ1 1025 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-205ENST00000429662 RRAGCQ9HB90 399 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 USP25Q9UHP3 1055 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 BCS1LQ9Y276 419 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
GABPB1-205ENST00000429662 THSD7BQ9C0I4 1608 aa10.32□□□□□ -0.76
GABPB1-205ENST00000429662 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 KDM4AO75164 1064 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 PTH1RQ03431 593 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
GABPB1-205ENST00000429662 CCDC83Q8IWF9 413 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms