RNA–Protein interactions for RNA: ENST00000428383.6

SNX31-202, Transcript of sorting nexin 31, humanhuman

TSL 1 (best) BASIC

Gene SNX31, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31-202ENST00000428383 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 KIF2CQ99661 725 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX31-202ENST00000428383 HELLSQ9NRZ9 838 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
SNX31-202ENST00000428383 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
SNX31-202ENST00000428383 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
SNX31-202ENST00000428383 SLC5A1P13866 664 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 PTMSP20962 102 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
SNX31-202ENST00000428383 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 NLRP3Q96P20 1036 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 GREM2Q9H772 168 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
SNX31-202ENST00000428383 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
SNX31-202ENST00000428383 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
SNX31-202ENST00000428383 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
SNX31-202ENST00000428383 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
SNX31-202ENST00000428383 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
SNX31-202ENST00000428383 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
SNX31-202ENST00000428383 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
SNX31-202ENST00000428383 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.34
SNX31-202ENST00000428383 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.34
SNX31-202ENST00000428383 MED23Q9ULK4 1368 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 TSGA10IPQ3SY00 556 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 VGLL2Q8N8G2 317 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
SNX31-202ENST00000428383 KCNB2Q92953 911 aa12.95□□□□□ -0.34
SNX31-202ENST00000428383 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
SNX31-202ENST00000428383 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SNX31-202ENST00000428383 BSDC1Q9NW68 430 aaPredicted RBP12.95□□□□□ -0.34
SNX31-202ENST00000428383 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
SNX31-202ENST00000428383 YY1P25490 414 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
SNX31-202ENST00000428383 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SNX31-202ENST00000428383 ANKRD2Q9GZV1 360 aa12.94□□□□□ -0.34
SNX31-202ENST00000428383 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
SNX31-202ENST00000428383 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
SNX31-202ENST00000428383 SEMA3EO15041 775 aa12.93□□□□□ -0.34
SNX31-202ENST00000428383 KCNJ4P48050 445 aa12.93□□□□□ -0.34
SNX31-202ENST00000428383 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
SNX31-202ENST00000428383 DSCC1Q9BVC3 393 aa12.93□□□□□ -0.34
SNX31-202ENST00000428383 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
SNX31-202ENST00000428383 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
SNX31-202ENST00000428383 NPHP1O15259 732 aa12.92□□□□□ -0.34
SNX31-202ENST00000428383 FGFR2P21802 821 aa12.92□□□□□ -0.34
SNX31-202ENST00000428383 TIMM10P62072 90 aa12.92□□□□□ -0.34
SNX31-202ENST00000428383 NUCB2P80303 420 aa12.92□□□□□ -0.34
SNX31-202ENST00000428383 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
SNX31-202ENST00000428383 ZNF594Q96JF6 807 aaPredicted RBP12.92□□□□□ -0.34
SNX31-202ENST00000428383 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
SNX31-202ENST00000428383 ALDH8A1Q9H2A2 487 aaPredicted RBP12.92□□□□□ -0.34
SNX31-202ENST00000428383 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 NEK4P51957 841 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 ST5P78524 1137 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
SNX31-202ENST00000428383 SH2B1Q9NRF2 756 aaPredicted RBP12.91□□□□□ -0.34
SNX31-202ENST00000428383 GOLIM4O00461 696 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
SNX31-202ENST00000428383 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 VPS53Q5VIR6 699 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
SNX31-202ENST00000428383 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
SNX31-202ENST00000428383 RPAP1Q9BWH6 1393 aaPredicted RBP12.9□□□□□ -0.34
SNX31-202ENST00000428383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
SNX31-202ENST00000428383 TAF5LO75529 589 aa12.89□□□□□ -0.35
SNX31-202ENST00000428383 NT5C2P49902 561 aa12.89□□□□□ -0.35
SNX31-202ENST00000428383 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
SNX31-202ENST00000428383 MAP3K12Q12852 859 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms