RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PTPDC1A2A3K4 754 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 PTGS1P23219 599 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 PDIA3P30101 505 aaKnown RBP9.24□□□□□ -0.93
LRCH3-204ENST00000428136 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-204ENST00000428136 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 BICD2Q8TD16 824 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 SHANK3Q9BYB0 1731 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 GOLIM4O00461 696 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
LRCH3-204ENST00000428136 ZSCAN25Q6NSZ9 544 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 DDX11Q96FC9 970 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 ZNF396Q96N95 335 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-204ENST00000428136 CCDC94Q9BW85 323 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-204ENST00000428136 PODXL2Q9NZ53 605 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 APOBRQ0VD83 1088 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 SYCP1Q15431 976 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 CCDC186Q7Z3E2 898 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 WDR19Q8NEZ3 1342 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 FOXP2O15409 715 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 TIMM10P62072 90 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 TRIM28Q13263 835 aaKnown RBP9.23□□□□□ -0.93
LRCH3-204ENST00000428136 STX1AQ16623 288 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 TTLL7Q6ZT98 887 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 ANKRD7Q92527 254 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 ISCA1Q9BUE6 129 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 DNAJC25Q9H1X3 360 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 KCND1Q9NSA2 647 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 PCDH11XQ9BZA7 1347 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 PCDH11YQ9BZA8 1340 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
LRCH3-204ENST00000428136 ATF3P18847 181 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 CCAR1Q8IX12 1150 aaKnown RBP9.23□□□□□ -0.93
LRCH3-204ENST00000428136 PLA2G12BQ9BX93 195 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 LRRC2Q9BYS8 371 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
LRCH3-204ENST00000428136 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 A0A1B0GUL7 405 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 A0A1W2PQ27 194 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 A0A1W2PQ64 194 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 A0A1W2PQD8 194 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 NEMFO60524 1076 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 ZFYP08048 801 aaPredicted RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 LRRC24Q50LG9 513 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 M0R2C6 588 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 IFIT1P09914 478 aaKnown RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 LRRFIP1Q32MZ4 808 aaKnown RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 TRIM5Q9C035 493 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 BCL2L12Q9HB09 334 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 NRBP1Q9UHY1 535 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 DHX40Q8IX18 779 aaKnown RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
LRCH3-204ENST00000428136 OSBP2Q969R2 916 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 NEUROD6Q96NK8 337 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 CTNNA3Q9UI47 895 aa9.22□□□□□ -0.93
LRCH3-204ENST00000428136 WDR17Q8IZU2 1322 aa9.21□□□□□ -0.93
LRCH3-204ENST00000428136 CSF1RP07333 972 aa9.21□□□□□ -0.93
LRCH3-204ENST00000428136 CHAF1AQ13111 956 aaPredicted RBP9.21□□□□□ -0.93
LRCH3-204ENST00000428136 ADALQ6DHV7 355 aa9.21□□□□□ -0.93
LRCH3-204ENST00000428136 C11orf57Q6ZUT1 292 aaPredicted RBP9.21□□□□□ -0.93
LRCH3-204ENST00000428136 BPIFA3Q9BQP9 254 aa9.21□□□□□ -0.93
LRCH3-204ENST00000428136 C4AP0C0L4 1744 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 C4BP0C0L5 1744 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 CHRNA2Q15822 529 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 SMAP1Q8IYB5 467 aaPredicted RBP9.21□□□□□ -0.94
LRCH3-204ENST00000428136 ZCRB1Q8TBF4 217 aaKnown RBP9.21□□□□□ -0.94
LRCH3-204ENST00000428136 CABLES1Q8TDN4 633 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 CACTINQ8WUQ7 758 aaKnown RBP9.21□□□□□ -0.94
LRCH3-204ENST00000428136 DDX17Q92841 729 aaKnown RBP9.21□□□□□ -0.94
LRCH3-204ENST00000428136 ANO10Q9NW15 660 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 AKAP2Q9Y2D5 859 aa9.21□□□□□ -0.94
LRCH3-204ENST00000428136 FGD1P98174 961 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 LRMPQ12912 555 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 LRRC8AQ8IWT6 810 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 CCDC144CPQ8IYA2 1237 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 MB21D2Q8IYB1 491 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 ZNF512BQ96KM6 892 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 SMTNL1A8MU46 457 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 A1BGP04217 495 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 CCT2P78371 535 aaKnown RBP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 CCDC73Q6ZRK6 1079 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 CADPS2Q86UW7 1296 aa9.2□□□□□ -0.94
LRCH3-204ENST00000428136 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 FTOQ9C0B1 505 aaKnown RBP eCLIP9.2□□□□□ -0.94
LRCH3-204ENST00000428136 POLR3EQ9NVU0 708 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms