RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PRKAG2Q9UGJ0 569 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 SLAIN2Q9P270 581 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 KIF5CO60282 957 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 STAT6P42226 847 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 CPLX3Q8WVH0 158 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 INCENPQ9NQS7 918 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 IKBKGQ9Y6K9 419 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 CTTNBP2Q8WZ74 1663 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 UQCRHP07919 91 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 SLC8A3P57103 927 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 SPAG5Q96R06 1193 aa11.34□□□□□ -0.59
CLTCL1-202ENST00000427926 ZBED4O75132 1171 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 RTL9Q8NET4 1388 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 GOLGA6L10A0A0M3HER8 536 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 NACA2Q9H009 215 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 KIAA0556O60303 1618 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 CNGA1P29973 690 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 HIBADHP31937 336 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 KRT79Q5XKE5 535 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 A2MP01023 1474 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 ZNF518AQ6AHZ1 1483 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 FLT4P35916 1363 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 NDC80O14777 642 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 ZSCAN12O43309 604 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 UBE4AQ14139 1066 aa11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-202ENST00000427926 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 MPNDQ8N594 471 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 ZMYM3Q14202 1370 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 PTPDC1A2A3K4 754 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 CTAGE5O15320 804 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 GNA11P29992 359 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 HS2ST1Q7LGA3 356 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 RHPN1Q8TCX5 695 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 SREK1Q8WXA9 508 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 AZI2Q9H6S1 392 aa11.32□□□□□ -0.6
CLTCL1-202ENST00000427926 FBLN1P23142 703 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 RALGAPBQ86X10 1494 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 SLU7O95391 586 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 CALML3P27482 149 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 PLEKHH1Q9ULM0 1364 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 RAB3IL1Q8TBN0 382 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 GOLGA1Q92805 767 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 PPP1R14CQ8TAE6 165 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 CRACR2AQ9BSW2 395 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 TRPM2O94759 1503 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 PAG1Q9NWQ8 432 aa11.31□□□□□ -0.6
CLTCL1-202ENST00000427926 ASIC1P78348 528 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 KIF4BQ2VIQ3 1234 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 RNF34Q969K3 372 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 PABPC4Q13310 644 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 MCMDC2Q4G0Z9 681 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 TRAPPC8Q9Y2L5 1435 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms